RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 MYL12AP19105 171 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 RAB7AP51149 207 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 RIPK1Q13546 671 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 C18orf65Q6ZTR6 163 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 C5orf56Q8N8D9 126 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 SMIM19Q96E16 107 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
CCDC9-202ENST00000595659 IL36GQ9NZH8 169 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 DIMT1Q9UNQ2 313 aaKnown RBP13.49□□□□□ -0.25
CCDC9-202ENST00000595659 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 TRAV8-7A0A075B6U6 113 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 PNMA8CA0A1B0GUJ8 204 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 SERPINE3A8MV23 424 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 CCRL2O00421 344 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 SDCBPO00560 298 aaPredicted RBP13.48□□□□□ -0.25
CCDC9-202ENST00000595659 KRTAP10-11P60412 298 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 SLC35A2P78381 396 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 PAX5Q02548 391 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 NHLRC3Q5JS37 347 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 OR8H3Q8N146 312 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 TMEM80Q96HE8 168 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 IFT22Q9H7X7 185 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 EXOSC1Q9Y3B2 195 aaKnown RBP13.48□□□□□ -0.25
CCDC9-202ENST00000595659 KIAA2026Q5HYC2 2103 aa13.48□□□□□ -0.25
CCDC9-202ENST00000595659 NOTCH3Q9UM47 2321 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 LINC01548A6NM66 108 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 C15orf65H3BRN8 121 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 EBAG9O00559 213 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 HSD17B6O14756 317 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 MT-ND4P03905 459 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 IGFBP3P17936 291 aaPredicted RBP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 GZMHP20718 246 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 RPS11P62280 158 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 DMKNQ6E0U4 476 aaPredicted RBP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 SLC16A12Q6ZSM3 486 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 GGHQ92820 318 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 MUL1Q969V5 352 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 CYYR1Q96J86 154 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
CCDC9-202ENST00000595659 PAK1IP1Q9NWT1 392 aaPredicted RBP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
CCDC9-202ENST00000595659 IRGMA1A4Y4 181 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.25
CCDC9-202ENST00000595659 K7EIL1 84 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 SLC31A2O15432 143 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 GAPDHP04406 335 aaKnown RBP13.46□□□□□ -0.25
CCDC9-202ENST00000595659 GTF2F2P13984 249 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
CCDC9-202ENST00000595659 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 GLIPR1L1Q6UWM5 242 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 ETV3LQ6ZN32 361 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 SLC35E3Q7Z769 313 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.25
CCDC9-202ENST00000595659 OR14A2Q96R54 314 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 CKLFQ9UBR5 152 aa13.46□□□□□ -0.25
CCDC9-202ENST00000595659 NUDT19A8MXV4 375 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF736B4DX44 427 aaPredicted RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 AIPO00170 330 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 MAS1P04201 325 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 VHLP40337 213 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ST3GAL4Q11206 333 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 Q499Y3 187 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 DEFB121Q5J5C9 76 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF497Q6ZNH5 498 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 LINC00596Q86U02 117 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 MRPL41Q8IXM3 137 aaKnown RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 PRR18Q8N4B5 295 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 OR4K15Q8NH41 348 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 CHPT1Q8WUD6 406 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 RCC1LQ96I51 464 aaKnown RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 BANF2Q9H503 90 aa13.45□□□□□ -0.26
CCDC9-202ENST00000595659 MRPS28Q9Y2Q9 187 aaKnown RBP13.45□□□□□ -0.26
CCDC9-202ENST00000595659 TRBV5-7A0A0A0MS05 114 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 FGF16O43320 207 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 ADARB1P78563 741 aaKnown RBP13.44□□□□□ -0.26
CCDC9-202ENST00000595659 DOC2BQ14184 412 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 SYT6Q5T7P8 510 aaPredicted RBP13.44□□□□□ -0.26
CCDC9-202ENST00000595659 TTC23Q5W5X9 447 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 OR2W3Q7Z3T1 314 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 C5orf24Q7Z6I8 188 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 STX19Q8N4C7 294 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 OR10V1Q8NGI7 309 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 DUX3Q96PT4 197 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 ETAA1Q9NY74 926 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms