RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MELTFP08582 738 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 SMIM18P0DKX4 95 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 SLC9A3R2Q15599 337 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 NKAPLQ5M9Q1 402 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 C6orf183Q5T699 404 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 PRAMEF5Q5TYX0 476 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 SLC16A12Q6ZSM3 486 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 ZNF554Q86TJ5 538 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 BEND2Q8NDZ0 799 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 NICN1Q9BSH3 213 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 DPAGT1Q9H3H5 408 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 PLEKHJ1Q9NW61 149 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 IDI2-AS1Q9NZ38 188 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 ZNRD1Q9P1U0 126 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 TRAPPC2LQ9UL33 140 aa20.96■□□□□ 0.95
TRIM28-204ENST00000594806 RNASE1P07998 156 aaKnown RBP20.95■□□□□ 0.94
TRIM28-204ENST00000594806 KRTAP24-1Q3LI83 254 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 MINOS1Q5TGZ0 78 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 ABHD12Q8N2K0 398 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 OR13F1Q8NGS4 319 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 ZNF596Q8TC21 504 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 KIRREL1Q96J84 757 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 MEGF9Q9H1U4 602 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 MINOS1-NBL1R4GNA1 71 aa20.95■□□□□ 0.94
TRIM28-204ENST00000594806 A0A0A6YYD4 124 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 UBE2QL1A1L167 161 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 HOXA3O43365 443 aaPredicted RBP20.94■□□□□ 0.94
TRIM28-204ENST00000594806 OMGP23515 440 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 SCAND1P57086 179 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 AANATQ16613 207 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 TMEM30BQ3MIR4 351 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 SFXN4Q6P4A7 337 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 CROCCP3Q8IVE0 287 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 OR52M1Q8NGK5 317 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 CREB3L1Q96BA8 519 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 MALSU1Q96EH3 234 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 SULT4A1Q9BR01 284 aa20.94■□□□□ 0.94
TRIM28-204ENST00000594806 RIMS4Q9H426 269 aaPredicted RBP20.94■□□□□ 0.94
TRIM28-204ENST00000594806 METTL21EPA6NDL7 271 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 POM121CA8CG34 1229 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 IER3P46695 156 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 PRRX1P54821 245 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 SRSF2Q01130 221 aaKnown RBP20.93■□□□□ 0.94
TRIM28-204ENST00000594806 DYNC1I2Q13409 638 aaKnown RBP20.93■□□□□ 0.94
TRIM28-204ENST00000594806 C6orf201Q7Z4U5 140 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 CCDC107Q8WV48 283 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 FAAP24Q9BTP7 215 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 RNF167Q9H6Y7 350 aa20.93■□□□□ 0.94
TRIM28-204ENST00000594806 MBNL3Q9NUK0 354 aaKnown RBP20.93■□□□□ 0.94
TRIM28-204ENST00000594806 BTBD17A6NE02 478 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 FOXI3A8MTJ6 420 aaPredicted RBP20.92■□□□□ 0.94
TRIM28-204ENST00000594806 SOCS1O15524 211 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 GDNFP39905 211 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 VEGFCP49767 419 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 Q6ZTK2 550 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 OR5R1Q8NH85 324 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 DYRK2Q92630 601 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 ARL11Q969Q4 196 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 AJUBAQ96IF1 538 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 FUNDC2Q9BWH2 189 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 KCNIP1Q9NZI2 227 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 DAPK2Q9UIK4 370 aa20.92■□□□□ 0.94
TRIM28-204ENST00000594806 C15orf65H3BRN8 121 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 TOR1AO14656 332 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 SPINT2O43291 252 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 SLC2A2P11168 524 aaPredicted RBP20.91■□□□□ 0.94
TRIM28-204ENST00000594806 NFYBP25208 207 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 SSTR5P35346 364 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 MXD1Q05195 221 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 C16orf87Q6PH81 154 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 OR4K15Q8NH41 348 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 OR9G1Q8NH87 305 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 MRPL30Q8TCC3 161 aaKnown RBP20.91■□□□□ 0.94
TRIM28-204ENST00000594806 MDFIQ99750 246 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 C19orf24Q9BVV8 132 aa20.91■□□□□ 0.94
TRIM28-204ENST00000594806 TRAV39A0A0B4J263 110 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 SMIM30A4D0T7 59 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 IGLV1-47P01700 117 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 HTR1DP28221 377 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 TMEM50BP56557 158 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 RPL15P61313 204 aaKnown RBP20.9■□□□□ 0.94
TRIM28-204ENST00000594806 Q3ZCU0 254 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 RFESDQ8TAC1 157 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 ZNF286AQ9HBT8 521 aa20.9■□□□□ 0.94
TRIM28-204ENST00000594806 TRBV6-6A0A0A6YYG2 114 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 F2RL2O00254 374 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 SCGNO76038 276 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 NAPSAO96009 420 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 ARL6IP1Q15041 203 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 LHFPL4Q7Z7J7 247 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 OR4P4Q8NGL7 312 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 DUX5Q96PT3 197 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 PECRQ9BY49 303 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 DPM3Q9P2X0 92 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 MGAT4AQ9UM21 535 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 COL6A5A8TX70 2615 aa20.89■□□□□ 0.93
TRIM28-204ENST00000594806 A0A0B4J203 849 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 VGLL3A8MV65 326 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 C12orf77C9JDV5 145 aa20.88■□□□□ 0.93
TRIM28-204ENST00000594806 CLEC2LP0C7M8 214 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms