RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GSX1Q9H4S2 264 aaPredicted RBP13.26□□□□□ -0.29
PNKP-204ENST00000594661 TMEM242Q9NWH2 141 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 GPR132Q9UNW8 380 aa13.26□□□□□ -0.29
PNKP-204ENST00000594661 TRBV24-1A0A075B6N3 115 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 F5H5K5 113 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 H0YL77 283 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 CHRM2P08172 466 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 IL6RP08887 468 aaPredicted RBP13.25□□□□□ -0.29
PNKP-204ENST00000594661 CST2P09228 141 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 PPP1CCP36873 323 aaKnown RBP13.25□□□□□ -0.29
PNKP-204ENST00000594661 HIST1H3AP68431 136 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 RNFT1Q5M7Z0 435 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 DOK3Q7L591 496 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 ZNF429Q86V71 674 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 FDCSPQ8NFU4 85 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 GVINP1Q7Z2Y8 2422 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 WIPF3A6NGB9 483 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 E9PLN8 166 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 SIAH2O43255 324 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 TCF21O43680 179 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 VSIG8P0DPA2 414 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 CCL1P22362 96 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 PDLIM4P50479 330 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
PNKP-204ENST00000594661 QRFPP83859 136 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 SLC9A3R2Q15599 337 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 FAM27BQ5VT28 67 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 CHST4Q8NCG5 386 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 OR8G5Q8NG78 346 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 FAM122AQ96E09 287 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 C5orf66Q9H5L9 145 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 METTL8Q9H825 291 aaKnown RBP13.25□□□□□ -0.29
PNKP-204ENST00000594661 TMEM38BQ9NVV0 291 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 FRYQ5TBA9 3013 aa13.25□□□□□ -0.29
PNKP-204ENST00000594661 IFNA6P05013 189 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 B4GALT1P15291 398 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 CTSSP25774 331 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 TNFSF10P50591 281 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 RSPO1Q2MKA7 263 aaPredicted RBP13.24□□□□□ -0.29
PNKP-204ENST00000594661 ASCL5Q7RTU5 278 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 OR5AS1Q8N127 324 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 FNDC9Q8TBE3 224 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 CPT1CQ8TCG5 803 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 TMEM45BQ96B21 275 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 DEFB127Q9H1M4 99 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 ZFP30Q9Y2G7 519 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 IGKV3D-15A0A087WSY6 115 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 K7N7A8 449 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 DEDDO75618 318 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 IGHV3-9P01782 118 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 CCKARP32238 428 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 P2RY1P47900 373 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 PMP22Q01453 160 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 CEACAM16Q2WEN9 425 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 SLC22A6Q4U2R8 563 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 BTNL3Q6UXE8 466 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 NIPSNAP3BQ9BS92 247 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 GPR35Q9HC97 309 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 GPR173Q9NS66 373 aa13.24□□□□□ -0.29
PNKP-204ENST00000594661 SPENQ96T58 3664 aaKnown RBP13.23□□□□□ -0.29
PNKP-204ENST00000594661 SCAF4O95104 1147 aaKnown RBP13.23□□□□□ -0.29
PNKP-204ENST00000594661 DIRAS3O95661 229 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 PRH1P02810 166 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 DBHP09172 617 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 IRF2P14316 349 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 RPL29P47914 159 aaKnown RBP13.23□□□□□ -0.29
PNKP-204ENST00000594661 GLIPR1L1Q6UWM5 242 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 TMEM178AQ8NBL3 297 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 PLEK2Q9NYT0 353 aa13.23□□□□□ -0.29
PNKP-204ENST00000594661 MRPS28Q9Y2Q9 187 aaKnown RBP13.23□□□□□ -0.29
PNKP-204ENST00000594661 A0A1W2PN81 502 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 PPP5D1E7EU14 171 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 C1QL1O75973 258 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 SYNGR4O95473 234 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 SERPINA2P20848 420 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 CHRNA7P36544 502 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 CHRFAM7AQ494W8 412 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 TSPO2Q5TGU0 170 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 TUSC5Q8IXB3 177 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 GPER1Q99527 375 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 FOXB1Q99853 325 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 PRR13Q9NZ81 148 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 GSKIPQ9P0R6 139 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
PNKP-204ENST00000594661 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
PNKP-204ENST00000594661 CEP250Q9BV73 2442 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 RTTNQ86VV8 2226 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 TMEM14DPA8MWL7 114 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms