RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ABCG5Q9H222 651 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 IFT22Q9H7X7 185 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 DCLRE1BQ9H816 532 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.35□□□□□ -1.07
USE1-203ENST00000593597 ZFP57Q9NU63 452 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 DHDHQ9UQ10 334 aa8.35□□□□□ -1.07
USE1-203ENST00000593597 CCL24O00175 119 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 CCRL2O00421 344 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 GEMIN2O14893 280 aaKnown RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 HTR3BO95264 441 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 LALBAP00709 142 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 C21orf33P30042 268 aaPredicted RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 VHLP40337 213 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 ALDH3A2P51648 485 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 ZNF134P52741 427 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 RBM11P57052 281 aaKnown RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 DOC2BQ14184 412 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 NHLRC3Q5JS37 347 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 ASPHD1Q5U4P2 390 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 SATL1Q86VE3 508 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 TGIF2LXQ8IUE1 241 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 CBR4Q8N4T8 237 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 FAM71E2Q8N5Q1 922 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 LINC00311Q8N616 119 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 ZNF565Q8N9K5 539 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 ZNF439Q8NDP4 499 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 OR10A7Q8NGE5 316 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 RHOXF1Q8NHV9 184 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 HAVCR2Q8TDQ0 301 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 TSEN15Q8WW01 171 aaKnown RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 RTN4IP1Q8WWV3 396 aaPredicted RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 DPF1Q92782 380 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 SLC29A1Q99808 456 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 BARHL1Q9BZE3 327 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 GPR61Q9BZJ8 451 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 FAM192AQ9GZU8 254 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 MRPS18AQ9NVS2 196 aaKnown RBP8.34□□□□□ -1.07
USE1-203ENST00000593597 GFOD1Q9NXC2 390 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 IL36GQ9NZH8 169 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 SCOCQ9UIL1 159 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
USE1-203ENST00000593597 SORL1Q92673 2214 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 WBP4O75554 376 aaKnown RBP8.33□□□□□ -1.08
USE1-203ENST00000593597 RAB3AP20336 220 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 SLC6A1P30531 599 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 KCNJ3P48549 501 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 F2RL1P55085 397 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 DGCR2P98153 550 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 FHL3Q13643 280 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 KIAA0141Q14154 515 aaPredicted RBP8.33□□□□□ -1.08
USE1-203ENST00000593597 RSU1Q15404 277 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 SMN1Q16637 294 aaKnown RBP8.33□□□□□ -1.08
USE1-203ENST00000593597 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 SLC16A12Q6ZSM3 486 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 MOB3BQ86TA1 216 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 OR10X1Q8NGY0 326 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 MYOZ3Q8TDC0 251 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 CCDC107Q8WV48 283 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 MCRIP2Q9BUT9 160 aaKnown RBP8.33□□□□□ -1.08
USE1-203ENST00000593597 LIN7CQ9NUP9 197 aaKnown RBP8.33□□□□□ -1.08
USE1-203ENST00000593597 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 GMPPBQ9Y5P6 360 aa8.33□□□□□ -1.08
USE1-203ENST00000593597 HYDINQ4G0P3 5121 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 C12orf77C9JDV5 145 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 AP4M1O00189 453 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 OR7C1O76099 320 aaPredicted RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 MT-ND4P03905 459 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 GAPDHP04406 335 aaKnown RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 IGFBP3P17936 291 aaPredicted RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 ETV1P50549 477 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 ZNF137PP52743 207 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 RAB25P57735 213 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 SLC35B1P78383 322 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 RAB40BQ12829 278 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 FOXE3Q13461 319 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 KIR2DS1Q14954 304 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 PNLIPRP3Q17RR3 467 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 CT45A1Q5HYN5 189 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 OR2G6Q5TZ20 316 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 TEX38Q6PEX7 206 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 FOXRED2Q8IWF2 684 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 COMMD1Q8N668 190 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 OR52N1Q8NH53 320 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 CT45A3Q8NHU0 189 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 ARL11Q969Q4 196 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 S1PR3Q99500 378 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 GPER1Q99527 375 aa8.32□□□□□ -1.08
USE1-203ENST00000593597 FGF20Q9NP95 211 aaPredicted RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 RCC2Q9P258 522 aaKnown RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 PLECQ15149 4684 aaKnown RBP8.32□□□□□ -1.08
USE1-203ENST00000593597 TRAV8-7A0A075B6U6 113 aa8.31□□□□□ -1.08
USE1-203ENST00000593597 TRBV5-5A0A0J9YX44 114 aa8.31□□□□□ -1.08
USE1-203ENST00000593597 TMEM30CPA0ZSE6 113 aa8.31□□□□□ -1.08
USE1-203ENST00000593597 NCBP2LA6PVI3 153 aaKnown RBP8.31□□□□□ -1.08
USE1-203ENST00000593597 SDCBPO00560 298 aaPredicted RBP8.31□□□□□ -1.08
USE1-203ENST00000593597 IGHG4P01861 327 aa8.31□□□□□ -1.08
USE1-203ENST00000593597 RPSAP08865 295 aaKnown RBP8.31□□□□□ -1.08
USE1-203ENST00000593597 SERPINA2P20848 420 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms