RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-212ENST00000593251 SOX2P48431 317 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
RETREG3-212ENST00000593251 PAX5Q02548 391 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 GALEQ14376 348 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 KIR2DS1Q14954 304 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 IZUMO1Q8IYV9 350 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 CCDC107Q8WV48 283 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 PLSCR3Q9NRY6 295 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 SCOCQ9UIL1 159 aa13.68□□□□□ -0.22
RETREG3-212ENST00000593251 TMEM212A6NML5 194 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 SDCBPO00560 298 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-212ENST00000593251 MPZL2O60487 215 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 OR7C1O76099 320 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-212ENST00000593251 CDRT1O95170 752 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 KCNJ3P48549 501 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 FOXE3Q13461 319 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 SLC25A30Q5SVS4 291 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 MEDAGQ5VYS4 303 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 RTN4IP1Q8WWV3 396 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-212ENST00000593251 ARL11Q969Q4 196 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 GON7Q9BXV9 100 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 TAS2R4Q9NYW5 299 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 ST3GAL6Q9Y274 331 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
RETREG3-212ENST00000593251 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 SLC31A2O15432 143 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 MAGEB3O15480 346 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 ELANEP08246 267 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 ZNF529Q6P280 563 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 SYS1Q8N2H4 156 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 TMEM104Q8NE00 496 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 Q8NFD4 153 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 RGP1Q92546 391 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-212ENST00000593251 MRPL48Q96GC5 212 aaKnown RBP13.66□□□□□ -0.22
RETREG3-212ENST00000593251 MYCBPQ99417 103 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-212ENST00000593251 S1PR3Q99500 378 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 RASL11BQ9BPW5 248 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 AMBNQ9NP70 447 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 ING4Q9UNL4 249 aa13.66□□□□□ -0.22
RETREG3-212ENST00000593251 TMEM30CPA0ZSE6 113 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 EI24O14681 340 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 GEMIN2O14893 280 aaKnown RBP13.65□□□□□ -0.22
RETREG3-212ENST00000593251 MOSP00540 346 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ALPLP05186 524 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 RPSAP08865 295 aaKnown RBP13.65□□□□□ -0.22
RETREG3-212ENST00000593251 GZMHP20718 246 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 CD1BP29016 333 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 GTF2A1P52655 376 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-212ENST00000593251 F2RL1P55085 397 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 RBM11P57052 281 aaKnown RBP13.65□□□□□ -0.22
RETREG3-212ENST00000593251 CFHR3Q02985 330 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 LINC00311Q8N616 119 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 RNF152Q8N8N0 203 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ST6GALNAC6Q969X2 333 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 CPNE2Q96FN4 548 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-212ENST00000593251 JAM3Q9BX67 310 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ERVK13-1Q9NX77 482 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 ORC6Q9Y5N6 252 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 RYR2Q92736 4967 aa13.65□□□□□ -0.22
RETREG3-212ENST00000593251 DYNC2H1Q8NCM8 4307 aaKnown RBP13.64□□□□□ -0.23
RETREG3-212ENST00000593251 SNTNA6NMZ2 147 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 C3orf84H3BNL1 204 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 RRP9O43818 475 aaKnown RBP13.64□□□□□ -0.23
RETREG3-212ENST00000593251 LY86O95711 162 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 IGHG4P01861 327 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 SERPINA2P20848 420 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 VDAC1P21796 283 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 RASSF2P50749 326 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 OR52M1Q8NGK5 317 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 OR52N1Q8NH53 320 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 NEK7Q8TDX7 302 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 C4orf3Q8WVX3 66 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 METTL9Q9H1A3 318 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 ZNF256Q9Y2P7 627 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-212ENST00000593251 SORL1Q92673 2214 aa13.64□□□□□ -0.23
RETREG3-212ENST00000593251 SLC2A2P11168 524 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-212ENST00000593251 GABRB1P18505 474 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 IL3RAP26951 378 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 SOX6P35712 828 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 GBX2P52951 348 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-212ENST00000593251 FHL3Q13643 280 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 FAM71E2Q8N5Q1 922 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 ORAI1Q96D31 301 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 KCTD7Q96MP8 289 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 IFT22Q9H7X7 185 aa13.63□□□□□ -0.23
RETREG3-212ENST00000593251 DNAH7Q8WXX0 4024 aa13.62□□□□□ -0.23
RETREG3-212ENST00000593251 A0A1W2PP11 408 aa13.62□□□□□ -0.23
RETREG3-212ENST00000593251 CSTBP04080 98 aaKnown RBP13.62□□□□□ -0.23
RETREG3-212ENST00000593251 MYF6P23409 242 aa13.62□□□□□ -0.23
RETREG3-212ENST00000593251 PSMB8P28062 276 aa13.62□□□□□ -0.23
RETREG3-212ENST00000593251 NHLRC3Q5JS37 347 aa13.62□□□□□ -0.23
RETREG3-212ENST00000593251 XAF1Q6GPH4 301 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms