RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 OR10R2Q8NGX6 335 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
DDX39A-221ENST00000593026 RAB3CQ96E17 227 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 PECRQ9BY49 303 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 TMEM133Q9H2Q1 129 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 ABRACLQ9P1F3 81 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
DDX39A-221ENST00000593026 RAB27BO00194 218 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 ORC5O43913 435 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
DDX39A-221ENST00000593026 SSTR5P35346 364 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 SAA4P35542 130 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 TMBIM6P55061 237 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 MIDNQ504T8 468 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 PLAC9Q5JTB6 97 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 C6orf183Q5T699 404 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 TRAT1Q6PIZ9 186 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
DDX39A-221ENST00000593026 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 OR5H6Q8NGV6 325 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 RFESDQ8TAC1 157 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 NDNFQ8TB73 568 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 KIRREL1Q96J84 757 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 DCSTAMPQ9H295 470 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 LINC00574Q9H8X3 128 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-221ENST00000593026 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 SPATA2Q9UM82 520 aa12.18□□□□□ -0.46
DDX39A-221ENST00000593026 SOX21Q9Y651 276 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-221ENST00000593026 IGHV2-26A0A0B4J1V2 119 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 A0A0U1RQK1 487 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 MEIOCA2RUB1 952 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 NPIPB11E5RHQ5 1161 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 TCF21O43680 179 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 SCGNO76038 276 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 RCC1P18754 421 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 NFYBP25208 207 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 GDNFP39905 211 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 DYNC1I2Q13409 638 aaKnown RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 LTC4SQ16873 150 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 DEFB112Q30KQ8 113 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 BAIAP2L2Q6UXY1 529 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 SIGLECL1Q8N7X8 197 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 OR10A7Q8NGE5 316 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 PHF21AQ96BD5 680 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 SLC25A38Q96DW6 304 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 BCL7BQ9BQE9 202 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 RIMS4Q9H426 269 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 RAB9BQ9NP90 201 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
DDX39A-221ENST00000593026 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 KCNIP1Q9NZI2 227 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 FAM96BQ9Y3D0 163 aa12.17□□□□□ -0.46
DDX39A-221ENST00000593026 A0A075B6Q4 140 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 MDFIC2A0A1B0GVS7 189 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 C15orf65H3BRN8 121 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 MFNGO00587 321 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 SPINT2O43291 252 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 NAPSAO96009 420 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ARG1P05089 322 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 GNB3P16520 340 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 RORCP51449 518 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 LGALS4P56470 323 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ARL6IP1Q15041 203 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 TUSC1Q2TAM9 212 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 OLFML2AQ68BL7 652 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ZNF626Q68DY1 528 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 ZNF48Q96MX3 618 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-221ENST00000593026 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
DDX39A-221ENST00000593026 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
DDX39A-221ENST00000593026 TAF9BQ9HBM6 251 aa12.16□□□□□ -0.46
DDX39A-221ENST00000593026 A0A0A6YYJ9 748 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 FBP1P09467 338 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 CD3GP09693 182 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 CD34P28906 385 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 HILS1P60008 231 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 SPCS2Q15005 226 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 SAMD12Q8N8I0 201 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 SETD6Q8TBK2 473 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms