RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 VMA21Q3ZAQ7 101 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 SCARF2Q96GP6 870 aaPredicted RBP11.1□□□□□ -0.63
DNMT1-228ENST00000592705 CCL19Q99731 98 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 H0Y8G0 127 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 HRASP01112 189 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 FOSL1P15407 271 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 TMEM11P17152 192 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 BCL3P20749 454 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 ATP1A1-AS1Q5TC04 95 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 LRRC29Q8WV35 223 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 AQP3Q92482 292 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 PSG11Q9UQ72 335 aa11.1□□□□□ -0.63
DNMT1-228ENST00000592705 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 FCGR3BO75015 233 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 CFDP00746 253 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 FBXW9Q5XUX1 488 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 CISD1Q9NZ45 108 aaKnown RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 SCN10AQ9Y5Y9 1956 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 BRCA1P38398 1863 aaKnown RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 RAB7AP51149 207 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 LY6DQ14210 128 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 SLC16A13Q7RTY0 426 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 PRSS12P56730 875 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF273Q14593 569 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 Q3ZCU0 254 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 ISOC2Q96AB3 205 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 GINS3Q9BRX5 216 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 LPAR5Q9H1C0 372 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 GPR132Q9UNW8 380 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 NEUROG3Q9Y4Z2 214 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 CACNA1HO95180 2353 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 RPL36A-HNRNPH2H7BZ11 118 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 GAPDHP04406 335 aaKnown RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
DNMT1-228ENST00000592705 MGAT2Q10469 447 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 ZNF154Q13106 437 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 NHLRC3Q5JS37 347 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 LINC00596Q86U02 117 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 WNT2BQ93097 391 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
DNMT1-228ENST00000592705 NKX2-6A6NCS4 301 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 PNPP00491 289 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 HLA-GP17693 338 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 SULT1A2P50226 295 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 LINC01590Q5TEZ4 76 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 Q9N2K0 584 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 CCL28Q9NRJ3 127 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 CDRT15L2A8MXV6 281 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 FGF2P09038 288 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 NAT1P18440 290 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 OR3A1P47881 315 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 FAM3AP98173 230 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 PIGYQ3MUY2 71 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 FDCSPQ8NFU4 85 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 NRIP2Q9BQI9 281 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 SLC45A2Q9UMX9 530 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 IGHV1-45A0A0A0MS14 117 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 BSXQ3C1V8 233 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 IGKV1D-42A0A075B6H8 117 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 A0A1B0GU03 582 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 OR2A4O95047 310 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 THY1P04216 161 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 IL11P20809 199 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 F2RP25116 425 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 DLK1P80370 383 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 ETV3LQ6ZN32 361 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 OR2A7Q96R45 310 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 SCN3AQ9NY46 2000 aa11.08□□□□□ -0.64
DNMT1-228ENST00000592705 DAOP14920 347 aa11.07□□□□□ -0.64
DNMT1-228ENST00000592705 ASCL5Q7RTU5 278 aa11.07□□□□□ -0.64
DNMT1-228ENST00000592705 ANAPC16Q96DE5 110 aa11.07□□□□□ -0.64
DNMT1-228ENST00000592705 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
DNMT1-228ENST00000592705 RTTNQ86VV8 2226 aa11.07□□□□□ -0.64
DNMT1-228ENST00000592705 A0A0G2JMZ2 1700 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms