RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PITPNC1Q9UKF7 332 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 AMMECR1Q9Y4X0 333 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-227ENST00000591849 V9GY05 133 aa8.17□□□□□ -1.1
BRCA1-227ENST00000591849 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 CLPSL1A2RUU4 121 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 ODF3BA8MYP8 253 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 SLC22A1O15245 554 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 CA11O75493 328 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 NDUFA7O95182 113 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 BPNT1O95861 308 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 IGHV3-7P01780 117 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 MT-ND4P03905 459 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 GLAP06280 429 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 VSIG8P0DPA2 414 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 MDKP21741 143 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-227ENST00000591849 BRS3P32247 399 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 GDNFP39905 211 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 MNDAP41218 407 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 GNG10P50151 68 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 RAB13P51153 203 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 SSX1Q16384 188 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 ARSJQ5FYB0 599 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-227ENST00000591849 C6orf183Q5T699 404 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 UBE2UQ5VVX9 321 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 SHISA2Q6UWI4 295 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 BAIAP2L2Q6UXY1 529 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 PRR18Q8N4B5 295 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 DTX3Q8N9I9 347 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 OR10A7Q8NGE5 316 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 OR4K15Q8NH41 348 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 Q96M66 194 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF286AQ9HBT8 521 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 CHMP1AQ9HD42 196 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-227ENST00000591849 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 PLEKHJ1Q9NW61 149 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 NDUFB11Q9NX14 153 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 SSR3Q9UNL2 185 aa8.16□□□□□ -1.1
BRCA1-227ENST00000591849 TENM1Q9UKZ4 2725 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 SDCBPO00560 298 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-227ENST00000591849 SLC17A2O00624 439 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 ORC5O43913 435 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 CD34P28906 385 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 BLVRBP30043 206 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-227ENST00000591849 SSTR5P35346 364 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 RPS27AP62979 156 aaKnown RBP8.15□□□□□ -1.1
BRCA1-227ENST00000591849 PAX5Q02548 391 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 NEDD8Q15843 81 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 SYT6Q5T7P8 510 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-227ENST00000591849 HES5Q5TA89 166 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 OLFML2AQ68BL7 652 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 C22orf42Q6IC83 251 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF497Q6ZNH5 498 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 OR2W3Q7Z3T1 314 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 LYPD6Q86Y78 171 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 OR4C13Q8NGP0 309 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 OR10X1Q8NGY0 326 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 UBALD1Q8TB05 177 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 SETD6Q8TBK2 473 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 RPEQ96AT9 228 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 KIRREL1Q96J84 757 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 NPFFR1Q9GZQ6 430 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 KCNK15Q9H427 330 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
BRCA1-227ENST00000591849 TRAV1-2A0A0B4J238 106 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 BUB1B-PAK6H3BSN5 160 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 J3QR06 171 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 CGB3P0DN86 165 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 CGB7P0DN87 165 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 RAB3BP20337 219 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 GALP22466 123 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 IL3RAP26951 378 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 CLDN12P56749 244 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 MRPS15P82914 257 aaKnown RBP8.14□□□□□ -1.11
BRCA1-227ENST00000591849 HLA-DRB5Q30154 266 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 C2orf76Q3KRA6 126 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 KCTD21Q4G0X4 260 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 TPTE2P1Q5T6R2 138 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 CCDC144NLQ6NUI1 221 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 SLC16A12Q6ZSM3 486 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 OR51D1Q8NGF3 324 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 OR4P4Q8NGL7 312 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 TOMM40LQ969M1 308 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 FAAP24Q9BTP7 215 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 MMP28Q9H239 520 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 RCC2Q9P258 522 aaKnown RBP8.14□□□□□ -1.11
BRCA1-227ENST00000591849 STEAP1Q9UHE8 339 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 STUB1Q9UNE7 303 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 MMP24Q9Y5R2 645 aa8.14□□□□□ -1.11
BRCA1-227ENST00000591849 A0A087WXM4 84 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 IGHV3-43A0A0B4J1X8 118 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms