RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PITX3O75364 302 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 OR2J2O76002 312 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF10P21506 573 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-228ENST00000590347 FOXL2P58012 376 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 OR1K1Q8NGR3 316 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 C18orf12Q96KH6 178 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 PLEKHF2Q9H8W4 249 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
CIRBP-228ENST00000590347 PHPT1Q9NRX4 125 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-228ENST00000590347 URB1O60287 2271 aaKnown RBP13.12□□□□□ -0.31
CIRBP-228ENST00000590347 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 GNRHRP30968 328 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 GRINAQ7Z429 371 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 D2HGDHQ8N465 521 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 SLC38A9Q8NBW4 561 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 FAM122AQ96E09 287 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF552Q9H707 407 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF286AQ9HBT8 521 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 HSPB2A8KAH6 182 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 SPINK4O60575 86 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF737O75373 536 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 HRASP01112 189 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 CRYAAP02489 173 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ADMP35318 185 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 RIPPLY3P57055 190 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 HSPB2Q16082 182 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 FFAR4Q5NUL3 377 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF776Q68DI1 518 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-228ENST00000590347 C16orf47Q6ZP98 133 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ZNF695Q8IW36 515 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 OR4D5Q8NGN0 318 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 TECTBQ96PL2 329 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM204Q9BSN7 226 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 A8MXE2 369 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 SERF1AO75920 110 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 HBE1P02100 147 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 IGFBP4P22692 258 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 PDLIM4P50479 330 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 PMP22Q01453 160 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ATP6V1FQ16864 119 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 WFDC8Q8IUA0 241 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 PARLQ9H300 379 aa13.11□□□□□ -0.31
CIRBP-228ENST00000590347 KNTC1P50748 2209 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 F5H5K5 113 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 GDF9O60383 454 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 CBLN1P23435 193 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 C1orf185Q5T7R7 199 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 LHX4Q969G2 390 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 NAT8Q9UHE5 227 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 NCOA6Q14686 2063 aaPredicted RBP13.1□□□□□ -0.31
CIRBP-228ENST00000590347 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 AADACP22760 399 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 NTSR1P30989 418 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 DEFB119Q8N690 84 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 TMEM242Q9NWH2 141 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 CISD1Q9NZ45 108 aaKnown RBP13.1□□□□□ -0.31
CIRBP-228ENST00000590347 RBM7Q9Y580 266 aaKnown RBP13.1□□□□□ -0.31
CIRBP-228ENST00000590347 FREM2Q5SZK8 3169 aa13.1□□□□□ -0.31
CIRBP-228ENST00000590347 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 SEMA4FO95754 770 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 SERPINA7P05543 415 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 VAMP3Q15836 100 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 SPATA45Q537H7 98 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 RNF133Q8WVZ7 376 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
CIRBP-228ENST00000590347 TMED7-TICAM2A0A0A6YYA0 188 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 AQP7P3A6NL99 342 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 H3BMH7 237 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 TAS2R30P59541 319 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 RPS21P63220 83 aaKnown RBP13.09□□□□□ -0.31
CIRBP-228ENST00000590347 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.09□□□□□ -0.31
CIRBP-228ENST00000590347 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 LYRM2Q9NU23 88 aaPredicted RBP13.09□□□□□ -0.31
CIRBP-228ENST00000590347 VDAC3Q9Y277 283 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 KIAA1549Q9HCM3 1950 aa13.09□□□□□ -0.31
CIRBP-228ENST00000590347 PLPP3O14495 311 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 HSPB6O14558 160 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 GYPAP02724 150 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 THBS3P49746 956 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.31
CIRBP-228ENST00000590347 BIDP55957 195 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 SGCBQ16585 318 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 ACOT6Q3I5F7 207 aaPredicted RBP13.08□□□□□ -0.31
CIRBP-228ENST00000590347 C16orf54Q6UWD8 224 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 OR2M3Q8NG83 312 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms