RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
MBD1-220ENST00000589758 KIAA2026Q5HYC2 2103 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 FAM172BPA6NC97 362 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 LY6LH3BQJ8 138 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 MRPS14O60783 128 aaKnown RBP11.48□□□□□ -0.57
MBD1-220ENST00000589758 CD24P25063 80 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 NFYBP25208 207 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 CD83Q01151 205 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 PAX5Q02548 391 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 SPARTQ8N0X7 666 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 Q8NFD4 153 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 THRSPQ92748 146 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 MUL1Q969V5 352 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 S100A13Q99584 98 aa11.48□□□□□ -0.57
MBD1-220ENST00000589758 PPIL3Q9H2H8 161 aaKnown RBP11.48□□□□□ -0.57
MBD1-220ENST00000589758 AMMECR1Q9Y4X0 333 aaPredicted RBP11.48□□□□□ -0.57
MBD1-220ENST00000589758 MEIKINA0A087WXM9 373 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 TRAV24A0A0B4J272 114 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 M0QZK8 103 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 CGB3P0DN86 165 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 CGB7P0DN87 165 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 SERPINA2P20848 420 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 PSMB9P28065 219 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 GLP1RP43220 463 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 GP2P55259 537 aaKnown RBP11.47□□□□□ -0.57
MBD1-220ENST00000589758 RBM39Q14498 530 aaKnown RBP11.47□□□□□ -0.57
MBD1-220ENST00000589758 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 ABCA11PQ4W5N1 156 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 HSD17B12Q53GQ0 312 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 FBLN7Q53RD9 439 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 OR10A7Q8NGE5 316 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 METTL9Q9H1A3 318 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 LINC00574Q9H8X3 128 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
MBD1-220ENST00000589758 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
MBD1-220ENST00000589758 PRKDCP78527 4128 aaKnown RBP11.47□□□□□ -0.57
MBD1-220ENST00000589758 J3QR06 171 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 HSPB6O14558 160 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 CSTBP04080 98 aaKnown RBP11.46□□□□□ -0.57
MBD1-220ENST00000589758 LPLP06858 475 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 FABP5Q01469 135 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 TRAM1Q15629 374 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 SSX1Q16384 188 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 SLC22A6Q4U2R8 563 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 AWAT2Q6E213 333 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 ZNF773Q6PK81 442 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 TMEM91Q6ZNR0 172 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 OR4X2Q8NGF9 303 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 TOMM40LQ969M1 308 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 RPEQ96AT9 228 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 IDI2-AS1Q9NZ38 188 aa11.46□□□□□ -0.57
MBD1-220ENST00000589758 A0A1W2PP11 408 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 NPIPB11E5RHQ5 1161 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 SC5DO75845 299 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 IL1AP01583 271 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 UCHL1P09936 223 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 PF4V1P10720 104 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 SRMP19623 302 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
MBD1-220ENST00000589758 PIGYQ3MUY2 71 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 UBE2UQ5VVX9 321 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 RSBN1Q5VWQ0 802 aaPredicted RBP11.45□□□□□ -0.58
MBD1-220ENST00000589758 GLIPR1L1Q6UWM5 242 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 NKAIN3Q8N8D7 197 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 WFDC9Q8NEX5 89 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 IL36GQ9NZH8 169 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 ST3GAL6Q9Y274 331 aa11.45□□□□□ -0.58
MBD1-220ENST00000589758 TSSC4Q9Y5U2 329 aaPredicted RBP11.45□□□□□ -0.58
MBD1-220ENST00000589758 TCRBV4S1A1TA0A5B7 111 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A18PA6NE21 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A16PA6NEW6 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A20PA6NIJ5 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A9PA6NNJ1 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A12PA8MX19 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A5PA8MXJ8 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 ZNF780AO75290 641 aaPredicted RBP11.44□□□□□ -0.58
MBD1-220ENST00000589758 AMY1AP04745 511 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 AMY2AP04746 511 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A15PP0C7V4 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A13PP0C7W8 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A14PP0C7W9 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 FAM90A24PP0C7X0 464 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 CD33P20138 364 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 GZMHP20718 246 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 RAB7AP51149 207 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 MADCAM1Q13477 382 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 NEDD8Q15843 81 aa11.44□□□□□ -0.58
MBD1-220ENST00000589758 KCTD21Q4G0X4 260 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms