RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 MMP28Q9H239 520 aa8.44□□□□□ -1.06
TPM4-209ENST00000588483 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
TPM4-209ENST00000588483 IDI2-AS1Q9NZ38 188 aa8.44□□□□□ -1.06
TPM4-209ENST00000588483 J3QR06 171 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 F2RL2O00254 374 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 SLC22A1O15245 554 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 MT-ND4P03905 459 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 SSTR5P35346 364 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 CEACAM3P40198 252 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 RAB13P51153 203 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 ARHGDIBP52566 201 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 PRRX1P54821 245 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 GABARAPL2P60520 117 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 RBM39Q14498 530 aaKnown RBP8.43□□□□□ -1.06
TPM4-209ENST00000588483 TMEM30BQ3MIR4 351 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 HSD17B12Q53GQ0 312 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 UTF1Q5T230 341 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 TPTE2P1Q5T6R2 138 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 SIGIRRQ6IA17 410 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 CCDC144NLQ6NUI1 221 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 TMEM91Q6ZNR0 172 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 CEACAM19Q7Z692 300 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 ZNF554Q86TJ5 538 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 MRGPRDQ8TDS7 321 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 WIPF2Q8TF74 440 aaPredicted RBP8.43□□□□□ -1.06
TPM4-209ENST00000588483 CST11Q9H112 138 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 ING3Q9NXR8 418 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 HILPDAQ9Y5L2 63 aa8.43□□□□□ -1.06
TPM4-209ENST00000588483 FAM172BPA6NC97 362 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 FAM90A9PA6NNJ1 464 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 MCRIP1C9JLW8 97 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 TOR1AO14656 332 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 TIMM23O14925 209 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 DENRO43583 198 aaKnown RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 CRTAPO75718 401 aaPredicted RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 ARL6IP5O75915 188 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 FUT3P21217 361 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 BRS3P32247 399 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 LOXL3P58215 753 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 RPS25P62851 125 aaKnown RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 QRFPP83859 136 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 SRSF4Q08170 494 aaKnown RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 PLA1AQ53H76 456 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 ATAD3CQ5T2N8 411 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 RAB12Q6IQ22 244 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 TRAT1Q6PIZ9 186 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 ZNF367Q7RTV3 350 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 LINC00311Q8N616 119 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 OR6M1Q8NGM8 313 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 CFHR4Q92496 578 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 CNBD2Q96M20 576 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 MGLLQ99685 303 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 TM2D1Q9BX74 207 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 SELENOIQ9C0D9 397 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 LIN7BQ9HAP6 207 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 ACOT13Q9NPJ3 140 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 MBNL3Q9NUK0 354 aaKnown RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 PSG11Q9UQ72 335 aa8.42□□□□□ -1.06
TPM4-209ENST00000588483 AMMECR1Q9Y4X0 333 aaPredicted RBP8.42□□□□□ -1.06
TPM4-209ENST00000588483 TMEM14DPA8MWL7 114 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 M0QZ24 198 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 AIPO00170 330 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 PDCD6O75340 191 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 BPNT1O95861 308 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 HSMCR30P0CW71 290 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 NFYBP25208 207 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 HTR2CP28335 458 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 RPS27AP62979 156 aaKnown RBP8.41□□□□□ -1.06
TPM4-209ENST00000588483 UNC119Q13432 240 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 HABP2Q14520 560 aaPredicted RBP8.41□□□□□ -1.06
TPM4-209ENST00000588483 CD200R1LQ6Q8B3 271 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 THNSL2Q86YJ6 484 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 RFESDQ8TAC1 157 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 KCNG3Q8TAE7 436 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 GFI1Q99684 422 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 YTHDF1Q9BYJ9 559 aaKnown RBP8.41□□□□□ -1.06
TPM4-209ENST00000588483 CCDC90BQ9GZT6 254 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 BANF2Q9H503 90 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 RAB9BQ9NP90 201 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 SERTAD4Q9NUC0 356 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 NDUFB11Q9NX14 153 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 GFOD1Q9NXC2 390 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 ETAA1Q9NY74 926 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 PEX16Q9Y5Y5 336 aa8.41□□□□□ -1.06
TPM4-209ENST00000588483 TRAV39A0A0B4J263 110 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 A0A1W2PPI3 338 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 C12orf77C9JDV5 145 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 SLC17A2O00624 439 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 OR2F2O95006 317 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 GALP22466 123 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 CHATP28329 748 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 MNDAP41218 407 aa8.4□□□□□ -1.06
TPM4-209ENST00000588483 RANBP1P43487 201 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms