RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
LINC01842-201ENST00000588275 PRR25Q96S07 402 aa13.22□□□□□ -0.29
LINC01842-201ENST00000588275 ERVK13-1Q9NX77 482 aa13.22□□□□□ -0.29
LINC01842-201ENST00000588275 ST3GAL6Q9Y274 331 aa13.22□□□□□ -0.29
LINC01842-201ENST00000588275 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 FADS2O95864 444 aaKnown RBP13.21□□□□□ -0.29
LINC01842-201ENST00000588275 CSTBP04080 98 aaKnown RBP13.21□□□□□ -0.29
LINC01842-201ENST00000588275 SERPINA2P20848 420 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 ALDH3A2P51648 485 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.29
LINC01842-201ENST00000588275 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.29
LINC01842-201ENST00000588275 GPR50Q13585 617 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 PNLIPRP3Q17RR3 467 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 ATAD3CQ5T2N8 411 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 SLC16A12Q6ZSM3 486 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 TGIF2LXQ8IUE1 241 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 IZUMO1Q8IYV9 350 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 OR5M8Q8NGP6 311 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 OR2T10Q8NGZ9 312 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 ARL11Q969Q4 196 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 S100A13Q99584 98 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 JAM3Q9BX67 310 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 ABCG5Q9H222 651 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 DCLRE1BQ9H816 532 aa13.21□□□□□ -0.29
LINC01842-201ENST00000588275 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
LINC01842-201ENST00000588275 GEMIN2O14893 280 aaKnown RBP13.2□□□□□ -0.3
LINC01842-201ENST00000588275 MPZL2O60487 215 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 RAMP3O60896 148 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 ATP5HO75947 161 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 CD2P06729 351 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 IL3RAP26951 378 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 GP2P55259 537 aaKnown RBP13.2□□□□□ -0.3
LINC01842-201ENST00000588275 RBM11P57052 281 aaKnown RBP13.2□□□□□ -0.3
LINC01842-201ENST00000588275 PAX5Q02548 391 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 EBI3Q14213 229 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 FAM53AQ6NSI3 398 aaPredicted RBP13.2□□□□□ -0.3
LINC01842-201ENST00000588275 RGP1Q92546 391 aaPredicted RBP13.2□□□□□ -0.3
LINC01842-201ENST00000588275 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 GON7Q9BXV9 100 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 METTL9Q9H1A3 318 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 U3KQK5 164 aa13.2□□□□□ -0.3
LINC01842-201ENST00000588275 RRP9O43818 475 aaKnown RBP13.19□□□□□ -0.3
LINC01842-201ENST00000588275 GABRB1P18505 474 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 GZMHP20718 246 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 ECI1P42126 302 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 PPP3R1P63098 170 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 DDI2Q5TDH0 399 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 CBR4Q8N4T8 237 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 Q8N9W7 124 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 OR52N1Q8NH53 320 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 GPR148Q8TDV2 347 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 RTN4IP1Q8WWV3 396 aaPredicted RBP13.19□□□□□ -0.3
LINC01842-201ENST00000588275 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
LINC01842-201ENST00000588275 Q96MT0 163 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 GFOD1Q9NXC2 390 aa13.19□□□□□ -0.3
LINC01842-201ENST00000588275 ZNF736B4DX44 427 aaPredicted RBP13.18□□□□□ -0.3
LINC01842-201ENST00000588275 SEC14L6B5MCN3 397 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 MOSP00540 346 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
LINC01842-201ENST00000588275 VDAC1P21796 283 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 ZNF93P35789 620 aaPredicted RBP13.18□□□□□ -0.3
LINC01842-201ENST00000588275 RAB40BQ12829 278 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 FOXE3Q13461 319 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 Q8N6K4 173 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 Q8NFD4 153 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 TMEM106AQ96A25 262 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 S1PR3Q99500 378 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 ASCL2Q99929 193 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 HSPB9Q9BQS6 159 aa13.18□□□□□ -0.3
LINC01842-201ENST00000588275 C15orf65H3BRN8 121 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 AIPO00170 330 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 SLC31A2O15432 143 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 ELANEP08246 267 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 KIR2DS1Q14954 304 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 ASCL4Q6XD76 172 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 PRR18Q8N4B5 295 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 LINC00311Q8N616 119 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 OR10V1Q8NGI7 309 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 ORAI1Q96D31 301 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 IFT22Q9H7X7 185 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
LINC01842-201ENST00000588275 A0A1W2PP11 408 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 MYF6P23409 242 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 CD1BP29016 333 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 BDKRB2P30411 391 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 SOX6P35712 828 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
LINC01842-201ENST00000588275 SLC22A6Q4U2R8 563 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 RHOXF1Q8NHV9 184 aa13.16□□□□□ -0.3
LINC01842-201ENST00000588275 PAK1IP1Q9NWT1 392 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms