RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GHSRQ92847 366 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 ARL11Q969Q4 196 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 SMIM19Q96E16 107 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 IFT22Q9H7X7 185 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 TRAV8-7A0A075B6U6 113 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 TRBV5-5A0A0J9YX44 114 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 A0A1W2PPK0 400 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 CCRL2O00421 344 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 IGFBP3P17936 291 aaPredicted RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 MYL12AP19105 171 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 RPS11P62280 158 aaKnown RBP eCLIP11.35□□□□□ -0.59
VMP1-206ENST00000587945 SLC35A2P78381 396 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 RIPK1Q13546 671 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 SLC16A12Q6ZSM3 486 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 OR10A7Q8NGE5 316 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 RDH12Q96NR8 316 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 S100A13Q99584 98 aa11.35□□□□□ -0.59
VMP1-206ENST00000587945 ZNF184Q99676 751 aaPredicted RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 DIMT1Q9UNQ2 313 aaKnown RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
VMP1-206ENST00000587945 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 SERPINE3A8MV23 424 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 EBAG9O00559 213 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
VMP1-206ENST00000587945 HSD17B6O14756 317 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 MT-ND4P03905 459 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 GZMHP20718 246 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 KRTAP10-11P60412 298 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 MUL1Q969V5 352 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 TMEM80Q96HE8 168 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 CYYR1Q96J86 154 aa11.34□□□□□ -0.59
VMP1-206ENST00000587945 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
VMP1-206ENST00000587945 IGHV1-3A0A0C4DH29 117 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 IRGMA1A4Y4 181 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 K7EIL1 84 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 SLC31A2O15432 143 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 FGF16O43320 207 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 GAPDHP04406 335 aaKnown RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 GTF2F2P13984 249 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 ZNF816Q0VGE8 651 aaPredicted RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 Q499Y3 187 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 ZNF497Q6ZNH5 498 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 LINC00596Q86U02 117 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 ZNF485Q8NCK3 441 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 GGHQ92820 318 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 PGLYRP3Q96LB9 341 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
VMP1-206ENST00000587945 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
VMP1-206ENST00000587945 TRBV5-7A0A0A0MS05 114 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 WI2-2373I1.2A0A1W2PRP0 233 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
VMP1-206ENST00000587945 ZNF736B4DX44 427 aaPredicted RBP11.32□□□□□ -0.6
VMP1-206ENST00000587945 AIPO00170 330 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 ZNF780AO75290 641 aaPredicted RBP11.32□□□□□ -0.6
VMP1-206ENST00000587945 GPX5O75715 221 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
VMP1-206ENST00000587945 DOC2BQ14184 412 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 EBI3Q14213 229 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 YIF1BQ5BJH7 314 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 TTC23Q5W5X9 447 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 OR2W3Q7Z3T1 314 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 JAGN1Q8N5M9 183 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 CHPT1Q8WUD6 406 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 OR14A2Q96R54 314 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 BANF2Q9H503 90 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 CKLFQ9UBR5 152 aa11.32□□□□□ -0.6
VMP1-206ENST00000587945 MRPS28Q9Y2Q9 187 aaKnown RBP11.32□□□□□ -0.6
VMP1-206ENST00000587945 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 C12orf77C9JDV5 145 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 ORC5O43913 435 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 IGHG2P01859 326 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 MAS1P04201 325 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 VHLP40337 213 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 ST3GAL4Q11206 333 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
VMP1-206ENST00000587945 LAIR2Q6ISS4 152 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 STX19Q8N4C7 294 aa11.31□□□□□ -0.6
VMP1-206ENST00000587945 LINC00311Q8N616 119 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms