RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KIF25Q9UIL4 384 aa16.64■□□□□ 0.25
TRIM47-204ENST00000587339 TEX13DA0A0J9YY54 714 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-204ENST00000587339 ZG16O60844 167 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 CYB5R3P00387 301 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-204ENST00000587339 LY6G6FQ5SQ64 297 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 FAM201AQ5SY85 155 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 ASB13Q8WXK3 278 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 PIK3IP1Q96FE7 263 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 WDR89Q96FK6 387 aaPredicted RBP16.63■□□□□ 0.25
TRIM47-204ENST00000587339 COQ2Q96H96 371 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 SAP30LQ9HAJ7 183 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 TAF9BQ9HBM6 251 aa16.63■□□□□ 0.25
TRIM47-204ENST00000587339 TRBV6-7A0A0A0MS04 114 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 B9A039 149 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 ZNF737O75373 536 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 TUSC2O75896 110 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 CLDN14O95500 239 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 HLA-GP17693 338 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 CD80P33681 288 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 EFNB3Q15768 340 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 KRBOX4Q5JUW0 171 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 ZNF808Q8N4W9 903 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-204ENST00000587339 OR11H4Q8NGC9 324 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 COQ8AQ8NI60 647 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 SLC2A9Q9NRM0 540 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 KCNIP1Q9NZI2 227 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 ANKHD1Q8IWZ3 2542 aaKnown RBP16.62■□□□□ 0.25
TRIM47-204ENST00000587339 CRYM-AS1A6NIL9 109 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 LRRC30A6NM36 301 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 G3V3Q6 166 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 IFNA2P01563 188 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 Q5BKY6 102 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 ANGPTL6Q8NI99 470 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 PPP1R35Q8TAP8 253 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 FAM222BQ8WU58 562 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 RTN4IP1Q8WWV3 396 aaPredicted RBP16.62■□□□□ 0.25
TRIM47-204ENST00000587339 RSRP1Q9BUV0 290 aa16.62■□□□□ 0.25
TRIM47-204ENST00000587339 ROS1P08922 2347 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 A0A0B4J2A0 478 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 DBX1A6NMT0 343 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 DEFB108AA8MXU0 73 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 CCSO14618 274 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 HMGN3Q15651 99 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 MST1LQ2TV78 715 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 PHLDA2Q53GA4 152 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 ZNF565Q8N9K5 539 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 PDCD10Q9BUL8 212 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 SHPKQ9UHJ6 478 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 KCNIP3Q9Y2W7 256 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 BOLA1Q9Y3E2 137 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 CACNA1DQ01668 2161 aa16.61■□□□□ 0.25
TRIM47-204ENST00000587339 OOEPA6NGQ2 149 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 NPIPB11E5RHQ5 1161 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 GLIPR1P48060 266 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 PAX5Q02548 391 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 ANKRD55Q3KP44 614 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 TGIF2LYQ8IUE0 185 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 LILRB1Q8NHL6 650 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-204ENST00000587339 SECTM1Q8WVN6 248 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 SNX22Q96L94 193 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 PLSCR3Q9NRY6 295 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 PRR13Q9NZ81 148 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 OR2W1Q9Y3N9 320 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 HSPA12AO43301 675 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 RGS11O94810 467 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 AGAP20933 346 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 GNRHRP30968 328 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 ZNF672Q499Z4 452 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-204ENST00000587339 H1FOOQ8IZA3 346 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-204ENST00000587339 TPRX1Q8N7U7 411 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 CCDC71LQ8N9Z2 235 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 ZNRF1Q8ND25 227 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 UBALD1Q8TB05 177 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 ITLN2Q8WWU7 325 aaPredicted RBP16.6■□□□□ 0.25
TRIM47-204ENST00000587339 OR1A1Q9P1Q5 309 aa16.6■□□□□ 0.25
TRIM47-204ENST00000587339 FAM25EA8MYX2 175 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 MGST3O14880 152 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 EDDM3AQ14507 147 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 MUC15Q8N387 334 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 ZNF561Q8N587 486 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 DEFB108BQ8NET1 73 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 MRGPRDQ8TDS7 321 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 GALMQ96C23 342 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 SLC5A7Q9GZV3 580 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 NAA60Q9H7X0 242 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 HIVEP3Q5T1R4 2406 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 IGSF10Q6WRI0 2623 aa16.59■□□□□ 0.25
TRIM47-204ENST00000587339 IGKV1D-13A0A0B4J2D9 117 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 C12orf77C9JDV5 145 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 K7N7A8 449 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 IGKV1-13P0DP09 117 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 MUC1P15941 1255 aaPredicted RBP16.58■□□□□ 0.25
TRIM47-204ENST00000587339 C6orf183Q5T699 404 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 STUMQ69YW2 141 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 ZBTB8BQ8NAP8 495 aaPredicted RBP16.58■□□□□ 0.25
TRIM47-204ENST00000587339 GRPEL2Q8TAA5 225 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 TMEM204Q9BSN7 226 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 DNTTIP1Q9H147 329 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 RAB18Q9NP72 206 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 DCAF16Q9NXF7 216 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms