RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PCGF1Q9BSM1 259 aa7.09□□□□□ -1.27
ATG4D-202ENST00000585437 MS4A7Q9GZW8 240 aaPredicted RBP7.09□□□□□ -1.27
ATG4D-202ENST00000585437 FAM234AQ9H0X4 552 aa7.09□□□□□ -1.27
ATG4D-202ENST00000585437 CNTD2Q9H8S5 307 aa7.09□□□□□ -1.27
ATG4D-202ENST00000585437 HRASLSQ9HDD0 168 aa7.09□□□□□ -1.27
ATG4D-202ENST00000585437 SOX21Q9Y651 276 aaPredicted RBP7.09□□□□□ -1.27
ATG4D-202ENST00000585437 TRAV18A0A075B6X5 111 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 A0A0B4J293 547 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 IGHV1-69DA0A0B4J2H0 117 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 MDFIC2A0A1B0GVS7 189 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM89A2RUT3 159 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 RNASEK-C17orf49H0YIS7 233 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 MT-ND4P03905 459 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 CHRM2P08172 466 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 HCKP08631 526 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 AKAIN1P0CW23 69 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 PRKACBP22694 351 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 PRTN3P24158 256 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 PRDX2P32119 198 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 GABRA2P47869 451 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 CEBPDP49716 269 aaPredicted RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 ATP1B3P54709 279 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 TAS2R19P59542 299 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 MRPS15P82914 257 aaKnown RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 CD300CQ08708 224 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 CBX3Q13185 183 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 ARL6IP1Q15041 203 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 RBMS2Q15434 407 aaKnown RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 DEFB112Q30KQ8 113 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 RUSC1-AS1Q66K80 236 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 LHFPL2Q6ZUX7 228 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 SLC25A26Q70HW3 274 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 LYPD6Q86Y78 171 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 PIP4P2Q8N4L2 257 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM185AQ8NFB2 350 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 KCNG3Q8TAE7 436 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 H1FXQ92522 213 aaKnown RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 SLAMF9Q96A28 289 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 URM1Q9BTM9 101 aaKnown RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 CST11Q9H112 138 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 C20orf85Q9H1P6 137 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 MED28Q9H204 178 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 ELL3Q9HB65 397 aaPredicted RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 GPN1Q9HCN4 374 aaPredicted RBP7.08□□□□□ -1.28
ATG4D-202ENST00000585437 C19orf12Q9NSK7 152 aa7.08□□□□□ -1.28
ATG4D-202ENST00000585437 TRAV6A0A075B6T7 132 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 IGKV1-12A0A0C4DH73 117 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 K7N7A8 449 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 KDM4BO94953 1096 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 CYB5AP00167 134 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 IGKV1D-12P01611 117 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 TK1P04183 234 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 GTF2F2P13984 249 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 NDUFB7P17568 137 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 TBPP20226 339 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 NPBWR2P48146 333 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 EFNB2P52799 333 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 MTCP1P56278 107 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 ZP1P60852 638 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 PDZK1IP1Q13113 114 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 ZNF146Q15072 292 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 SLC9A3R2Q15599 337 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 HCP5Q6MZN7 132 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 RBMS3Q6XE24 437 aaKnown RBP7.07□□□□□ -1.28
ATG4D-202ENST00000585437 Q6YL49 198 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 RNF144BQ7Z419 303 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 MKXQ8IYA7 352 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 SAXO1Q8IYX7 474 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 BATF2Q8N1L9 274 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 C11orf42Q8N5U0 333 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM86BQ8N661 226 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM229BQ8NBD8 167 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 OR52N4Q8NGI2 321 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 OR4D6Q8NGJ1 314 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 GPX8Q8TED1 209 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 GIMAP1Q8WWP7 306 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 LHX4Q969G2 390 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 GPER1Q99527 375 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 METTL8Q9H825 291 aaKnown RBP7.07□□□□□ -1.28
ATG4D-202ENST00000585437 RHOFQ9HBH0 211 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 MCUBQ9NWR8 336 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 ONECUT1Q9UBC0 465 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 IL36RNQ9UBH0 155 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 KLK11Q9UBX7 282 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 MRPS28Q9Y2Q9 187 aaKnown RBP7.07□□□□□ -1.28
ATG4D-202ENST00000585437 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
ATG4D-202ENST00000585437 CMYA5Q8N3K9 4069 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM82A0PJX8 343 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 TMEM14DPA8MWL7 114 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 SPRY1O43609 319 aaPredicted RBP7.06□□□□□ -1.28
ATG4D-202ENST00000585437 NDUFB6O95139 128 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 C1QBP02746 253 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 IL5P05113 134 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 MELTFP08582 738 aa7.06□□□□□ -1.28
ATG4D-202ENST00000585437 GSTP1P09211 210 aaKnown RBP7.06□□□□□ -1.28
ATG4D-202ENST00000585437 VSIG8P0DPA2 414 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms