RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 LGALS12Q96DT0 336 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 TMEM212A6NML5 194 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 GABRPO00591 440 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 IGHG4P01861 327 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 ECI1P42126 302 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 REG1BP48304 166 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
SDF2-202ENST00000585428 OR10K1Q8NGX5 313 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 OR5AK2Q8NH90 309 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 S1PR3Q99500 378 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 ASCL2Q99929 193 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 PDCD1LG2Q9BQ51 273 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 DPCDQ9BVM2 203 aaPredicted RBP11.31□□□□□ -0.6
SDF2-202ENST00000585428 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 IMPAD1Q9NX62 359 aa11.31□□□□□ -0.6
SDF2-202ENST00000585428 ZNF736B4DX44 427 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 MOSP00540 346 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 IGF1P05019 195 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 ALPLP05186 524 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 GABRB1P18505 474 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 RAB3AP20336 220 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 PSMB8P28062 276 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 CHATP28329 748 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 VHLP40337 213 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 F2RL1P55085 397 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 FHL3Q13643 280 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 KIAA0141Q14154 515 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 RSU1Q15404 277 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 SATL1Q86VE3 508 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 FAM71E2Q8N5Q1 922 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 OR51A2Q8NGJ7 313 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 TNFAIP8L1Q8WVP5 186 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 C4orf3Q8WVX3 66 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 RTN4IP1Q8WWV3 396 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 ARL11Q969Q4 196 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 MRPL48Q96GC5 212 aaKnown RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 MYCBPQ99417 103 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 AASSQ9UDR5 926 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 DHDHQ9UQ10 334 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
SDF2-202ENST00000585428 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
SDF2-202ENST00000585428 SEC14L6B5MCN3 397 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 MAGEB3O15480 346 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 ORC5O43913 435 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 HTR3BO95264 441 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 MT-ND4P03905 459 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 ZNF134P52741 427 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 MRPL28Q13084 256 aaKnown RBP11.29□□□□□ -0.6
SDF2-202ENST00000585428 KLHL22Q53GT1 634 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 LPCAT4Q643R3 524 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 OR8H1Q8NGG4 311 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 MYOZ3Q8TDC0 251 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
SDF2-202ENST00000585428 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 IL36GQ9NZH8 169 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
SDF2-202ENST00000585428 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 SNTNA6NMZ2 147 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
SDF2-202ENST00000585428 CDRT1O95170 752 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 ZNF137PP52743 207 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 Q3ZCU0 254 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 OR52N1Q8NH53 320 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 RBMXL1Q96E39 390 aaKnown RBP11.28□□□□□ -0.6
SDF2-202ENST00000585428 GPER1Q99527 375 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 CHCHD6Q9BRQ6 235 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 ING4Q9UNL4 249 aa11.28□□□□□ -0.6
SDF2-202ENST00000585428 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
SDF2-202ENST00000585428 TMEM30CPA0ZSE6 113 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 I3L521 148 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 GEMIN2O14893 280 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 RRP9O43818 475 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 SOX6P35712 828 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 INSL3P51460 131 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 GBX2P52951 348 aaPredicted RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 ZIK1Q3SY52 487 aaPredicted RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 CASC10Q5T4H9 136 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 ZNF497Q6ZNH5 498 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 RHOXF1Q8NHV9 184 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 RGP1Q92546 391 aaPredicted RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms