RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ALOX5APP20292 161 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 FABP5Q01469 135 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 CDK5R1Q15078 307 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 TPTE2P1Q5T6R2 138 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 DMKNQ6E0U4 476 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-220ENST00000585031 C5orf56Q8N8D9 126 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 YIPF7Q8N8F6 280 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 OR5M8Q8NGP6 311 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 SMIM19Q96E16 107 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 TTTY10Q9BZA0 68 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 SLIRPQ9GZT3 109 aaKnown RBP14.17□□□□□ -0.14
TOP3A-220ENST00000585031 RNF167Q9H6Y7 350 aa14.17□□□□□ -0.14
TOP3A-220ENST00000585031 IGKV1-27A0A075B6S5 117 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 TMEM269A0A1B0GVZ9 245 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 SERPINE3A8MV23 424 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 BUB1B-PAK6H3BSN5 160 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 M0QZK8 103 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 GABRPO00591 440 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 RORCP51449 518 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 MFGE8Q08431 387 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-220ENST00000585031 CLVS2Q5SYC1 327 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 COMMD2Q86X83 199 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 WDR12Q9GZL7 423 aaKnown RBP14.16□□□□□ -0.14
TOP3A-220ENST00000585031 PLGRKTQ9HBL7 147 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 HMG20AQ9NP66 347 aa14.16□□□□□ -0.14
TOP3A-220ENST00000585031 TRBV2A0A0J9YWF9 115 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 E9PI62 339 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 CDRT1O95170 752 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 TTRP02766 147 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 FRMD6-AS1P0C7T7 363 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 CDK2P24941 298 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 DUSP1P28562 367 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 S100A5P33763 92 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 IL24Q13007 206 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 ZNF846Q147U1 533 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 KIR2DS1Q14954 304 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 GRK1Q15835 563 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 HLA-DRB5Q30154 266 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 ZNF260Q3ZCT1 412 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 STPG2Q8N412 459 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 OR6Q1Q8NGQ2 317 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 TRMT10AQ8TBZ6 339 aaKnown RBP14.15□□□□□ -0.14
TOP3A-220ENST00000585031 SLAMF9Q96A28 289 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 PKIBQ9C010 78 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 NXF2Q9GZY0 626 aaKnown RBP14.15□□□□□ -0.14
TOP3A-220ENST00000585031 EDA2RQ9HAV5 297 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 PEX16Q9Y5Y5 336 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 SIRT4Q9Y6E7 314 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-220ENST00000585031 RYR1P21817 5038 aa14.15□□□□□ -0.14
TOP3A-220ENST00000585031 A0A075B6Q4 140 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 A0A1B0GTI1 187 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 ACOD1A6NK06 481 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 DHRS3O75911 302 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 LY86O95711 162 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 IGHG2P01859 326 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 MYL9P24844 172 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 HEPN1Q6WQI6 88 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 RTN4RL2Q86UN3 420 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 ZNF596Q8TC21 504 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 PHYHIPQ92561 330 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 AP3S1Q92572 193 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 BORCS5Q969J3 196 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 MROQ9BYG7 248 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 MRM2Q9UI43 246 aaKnown RBP14.14□□□□□ -0.15
TOP3A-220ENST00000585031 V9GYS6 101 aa14.14□□□□□ -0.15
TOP3A-220ENST00000585031 ZNF254O75437 659 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 SRSF10O75494 262 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 GATBO75879 557 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 HAND1O96004 215 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 CALCBP10092 127 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 GABRR1P24046 479 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 CD34P28906 385 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 RPS19P39019 145 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 OR3A1P47881 315 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 MTNR1BP49286 362 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 RIDAP52758 137 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 ROM1Q03395 351 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 ALKBH1Q13686 389 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 HNF4GQ14541 408 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 CROCCP3Q8IVE0 287 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 ZNF679Q8IYX0 411 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 OR14K1Q8NGZ2 314 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 THRSPQ92748 146 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 GHSRQ92847 366 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 PGLYRP3Q96LB9 341 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 CEP19Q96LK0 163 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 C6orf62Q9GZU0 229 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 COMMD4Q9H0A8 199 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
TOP3A-220ENST00000585031 NUFIP1Q9UHK0 495 aaKnown RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 UBE2J1Q9Y385 318 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-220ENST00000585031 MAGEB4O15481 346 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-220ENST00000585031 ARL6IP5O75915 188 aa14.12□□□□□ -0.15
TOP3A-220ENST00000585031 RPP14O95059 124 aaKnown RBP14.12□□□□□ -0.15
TOP3A-220ENST00000585031 HCKP08631 526 aa14.12□□□□□ -0.15
TOP3A-220ENST00000585031 SDC2P34741 201 aa14.12□□□□□ -0.15
TOP3A-220ENST00000585031 FHL3Q13643 280 aa14.12□□□□□ -0.15
TOP3A-220ENST00000585031 ZNF829Q3KNS6 432 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-220ENST00000585031 ACSM3Q53FZ2 586 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms