RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ATXN7L3Q14CW9 347 aaPredicted RBP8.14□□□□□ -1.11
GGA3-219ENST00000584550 TRAM1Q15629 374 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 SSX1Q16384 188 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 PAN3Q58A45 887 aaKnown RBP8.14□□□□□ -1.11
GGA3-219ENST00000584550 ZFAND6Q6FIF0 208 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 ELP2Q6IA86 826 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 ZNF773Q6PK81 442 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 ZNF782Q6ZMW2 699 aaPredicted RBP8.14□□□□□ -1.11
GGA3-219ENST00000584550 TMEM91Q6ZNR0 172 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 LRRTM1Q86UE6 522 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 NKAIN3Q8N8D7 197 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 OR4D6Q8NGJ1 314 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 PRR25Q96S07 402 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 BANF2Q9H503 90 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 SEBOXQ9HB31 216 aaPredicted RBP8.14□□□□□ -1.11
GGA3-219ENST00000584550 ZNF581Q9P0T4 197 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 PITPNC1Q9UKF7 332 aa8.14□□□□□ -1.11
GGA3-219ENST00000584550 TRAV24A0A0B4J272 114 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 hCG_1809904A0A1W2PP81 198 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 A0A1W2PPE2 198 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 A0A1W2PR64 198 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 A0A1W2PRV1 198 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 GEMIN2O14893 280 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 ZNF780AO75290 641 aaPredicted RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 CRTAPO75718 401 aaPredicted RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 SC5DO75845 299 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 OR7C1O76099 320 aaPredicted RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 ARG1P05089 322 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 ZNF728P0DKX0 622 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 GTF2F2P13984 249 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 PSMA1P25786 263 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 CALRP27797 417 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 P2RX3P56373 397 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 RBM11P57052 281 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 GPR176Q14439 515 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 IL13RA2Q14627 380 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 NEDD8Q15843 81 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 KRBOX4Q5JUW0 171 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 LDLRAD2Q5SZI1 272 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 ATAD3CQ5T2N8 411 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 GLT8D1Q68CQ7 371 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 CDH26Q8IXH8 852 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 C11orf42Q8N5U0 333 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 CHST4Q8NCG5 386 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 OR4X2Q8NGF9 303 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 OR51T1Q8NGJ9 327 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 PHYHIPQ92561 330 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 FAM46BQ96A09 425 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 SELENOIQ9C0D9 397 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 PCDHB16Q9NRJ7 776 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 IL36GQ9NZH8 169 aa8.13□□□□□ -1.11
GGA3-219ENST00000584550 AK6Q9Y3D8 172 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 LSM4Q9Y4Z0 139 aaKnown RBP8.13□□□□□ -1.11
GGA3-219ENST00000584550 TRGV10A0A0A0MS01 117 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 FUOMA2VDF0 154 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 FAM90A8PA6NJQ4 464 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 SH2D7A6NKC9 451 aaPredicted RBP8.12□□□□□ -1.11
GGA3-219ENST00000584550 CCRL2O00421 344 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 ARL6IP5O75915 188 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 LPLP06858 475 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 MEF2CQ06413 473 aaPredicted RBP8.12□□□□□ -1.11
GGA3-219ENST00000584550 P2RY14Q15391 338 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 UBE2UQ5VVX9 321 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 OR10K2Q6IF99 312 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 ETV3LQ6ZN32 361 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 TCF23Q7RTU1 214 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 SUMF2Q8NBJ7 301 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 TMEM104Q8NE00 496 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 Q8NFD4 153 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 NEK7Q8TDX7 302 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 FCGR1BQ92637 280 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 FOXRED1Q96CU9 486 aaPredicted RBP8.12□□□□□ -1.11
GGA3-219ENST00000584550 COQ2Q96H96 371 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 ZNF714Q96N38 554 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 UQCC2Q9BRT2 126 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 PLGRKTQ9HBL7 147 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 HILPDAQ9Y5L2 63 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 LINC00312Q9Y6C7 94 aa8.12□□□□□ -1.11
GGA3-219ENST00000584550 MEIKINA0A087WXM9 373 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 TRAV39A0A0B4J263 110 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 ODAMA1E959 279 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 C17orf98A8MV24 154 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 MGMTP16455 207 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 CD24P25063 80 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 HTR2CP28335 458 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 ERP29P30040 261 aaKnown RBP8.11□□□□□ -1.11
GGA3-219ENST00000584550 GLP1RP43220 463 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 DLX6P56179 175 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 DYNC1I2Q13409 638 aaKnown RBP8.11□□□□□ -1.11
GGA3-219ENST00000584550 KCTD21Q4G0X4 260 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 PRAMEF5Q5TYX0 476 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 C22orf42Q6IC83 251 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 ADAMTSL5Q6ZMM2 481 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 C18orf65Q6ZTR6 163 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 LYPD6Q86Y78 171 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 PLPPR1Q8TBJ4 325 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 MALSU1Q96EH3 234 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 DUX3Q96PT4 197 aa8.11□□□□□ -1.11
GGA3-219ENST00000584550 MCRIP2Q9BUT9 160 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms