RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 RABL2AQ9UBK7 228 aaPredicted RBP1.12□□□□□ -2.23
SKA2-210ENST00000584089 TBL2Q9Y4P3 447 aaKnown RBP1.12□□□□□ -2.23
SKA2-210ENST00000584089 COL4A1P02462 1669 aa1.12□□□□□ -2.23
SKA2-210ENST00000584089 IGSF23A1L1A6 192 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 UBDO15205 165 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 SC5DO75845 299 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 GIMD1P0DJR0 217 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 ZNF7P17097 686 aaPredicted RBP1.11□□□□□ -2.23
SKA2-210ENST00000584089 RANBP1P43487 201 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 HES1Q14469 280 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 HBMQ6B0K9 141 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 LAMTOR1Q6IAA8 161 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 Q6ZSA8 131 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 ZNF321PQ8N8H1 164 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 LGALS14Q8TCE9 139 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 PDCD6IPQ8WUM4 868 aaKnown RBP1.11□□□□□ -2.23
SKA2-210ENST00000584089 MITD1Q8WV92 249 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 CACNG8Q8WXS5 425 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 ZMYND19Q96E35 227 aaPredicted RBP1.11□□□□□ -2.23
SKA2-210ENST00000584089 STMN3Q9NZ72 180 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 HEY1Q9Y5J3 304 aa1.11□□□□□ -2.23
SKA2-210ENST00000584089 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
SKA2-210ENST00000584089 A0A0J9YX75 114 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 FNDC10F2Z333 226 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 F8VP50 259 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 TRAPPC3O43617 180 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 OTCP00480 354 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 LTAP01374 205 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 TSPOP30536 169 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 HSPA13P48723 471 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 ATP5J2P56134 94 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 PRDX1Q06830 199 aaKnown RBP1.1□□□□□ -2.23
SKA2-210ENST00000584089 TSPAN31Q12999 210 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 VAMP3Q15836 100 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 HNRNPA1L2Q32P51 320 aaKnown RBP1.1□□□□□ -2.23
SKA2-210ENST00000584089 C6orf183Q5T699 404 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 FAM162BQ5T6X4 162 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 SDIM1Q6ZPB5 146 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 DEFB119Q8N690 84 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 ASCC1Q8N9N2 400 aaKnown RBP1.1□□□□□ -2.23
SKA2-210ENST00000584089 CIDECQ96AQ7 238 aaPredicted RBP1.1□□□□□ -2.23
SKA2-210ENST00000584089 BCL7BQ9BQE9 202 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 EBPLQ9BY08 206 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 RMND1Q9NWS8 449 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 FAM206AQ9NX38 181 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 FBXL3Q9UKT7 428 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 MTCH2Q9Y6C9 303 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 ARHGAP32A7KAX9 2087 aa1.1□□□□□ -2.23
SKA2-210ENST00000584089 TRAV8-2A0A0B4J237 113 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 IGKV1-12A0A0C4DH73 117 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 FGF16O43320 207 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 ZMPSTE24O75844 475 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 IGKV1D-12P01611 117 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 GZMBP10144 247 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 RPA3P35244 121 aaPredicted RBP1.09□□□□□ -2.23
SKA2-210ENST00000584089 HTR4Q13639 388 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 CAVIN4Q5BKX8 364 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 N4BP2L1Q5TBK1 243 aaPredicted RBP1.09□□□□□ -2.23
SKA2-210ENST00000584089 DGAT2L6Q6ZPD8 337 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 FAM183BPQ6ZVS7 135 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 CNPY4Q8N129 248 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 ZFAND2AQ8N6M9 145 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 ERMNQ8TAM6 284 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 DCANP1Q8TF63 244 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 OR51B4Q9Y5P0 310 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 ATAD5Q96QE3 1844 aa1.09□□□□□ -2.23
SKA2-210ENST00000584089 MYO5BQ9ULV0 1848 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 MUC21A0A0G2JKD1 596 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 MUC21A0A140T8X8 626 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 IGKV2-29A2NJV5 120 aaPredicted RBP1.08□□□□□ -2.24
SKA2-210ENST00000584089 RNASEK-C17orf49H0YIS7 233 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 TOR1AO14656 332 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 CRYGDP07320 174 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 SPNP16150 400 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 SPAM1P38567 509 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 MP68P56378 58 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 RAB2AP61019 212 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 ZNF117Q03924 483 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 TRIP13Q15645 432 aaPredicted RBP1.08□□□□□ -2.24
SKA2-210ENST00000584089 FAM19A3Q7Z5A8 133 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 ACBD4Q8NC06 268 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 OR2AE1Q8NHA4 323 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 DTD1Q8TEA8 209 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 TMBIM1Q969X1 311 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 ZNF625Q96I27 306 aaPredicted RBP1.08□□□□□ -2.24
SKA2-210ENST00000584089 POTEKPQ9BYX7 375 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 WASHC3Q9Y3C0 194 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 BZW2Q9Y6E2 419 aaKnown RBP1.08□□□□□ -2.24
SKA2-210ENST00000584089 USH1CQ9Y6N9 552 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 NCKAP5O14513 1909 aa1.08□□□□□ -2.24
SKA2-210ENST00000584089 CRB1P82279 1406 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 MED13Q9UHV7 2174 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 LAMB2P55268 1798 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 MYO15BQ96JP2 1530 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 SIGLEC16A6NMB1 481 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 hCG_2039718K7EN88 272 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 OR4A8P0C604 315 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 NQO1P15559 274 aaKnown RBP1.07□□□□□ -2.24
SKA2-210ENST00000584089 MAGEA3P43357 314 aa1.07□□□□□ -2.24
SKA2-210ENST00000584089 RWDD2BP57060 319 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms