RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 C2orf76Q3KRA6 126 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
SKA2-209ENST00000583976 TMEM200BQ69YZ2 307 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 C11orf42Q8N5U0 333 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 SUMF2Q8NBJ7 301 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 KCNG3Q8TAE7 436 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 PIFOQ8TCI5 191 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
SKA2-209ENST00000583976 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
SKA2-209ENST00000583976 RANBP3Q9H6Z4 567 aaPredicted RBP12.64□□□□□ -0.39
SKA2-209ENST00000583976 CD28P10747 220 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 GLIPR1P48060 266 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 ALDH3B2P48448 385 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 QRFPP83859 136 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 UNC119Q13432 240 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 OXLD1Q5BKU9 147 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 LDLRAD2Q5SZI1 272 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 GPR107Q5VW38 600 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 GPR141Q7Z602 305 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 TPRA1Q86W33 373 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 TMEM219Q86XT9 240 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 NEK7Q8TDX7 302 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 Q96M66 194 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 NICN1Q9BSH3 213 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 DPCDQ9BVM2 203 aaPredicted RBP12.63□□□□□ -0.39
SKA2-209ENST00000583976 TMEM59Q9BXS4 323 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 NPFFR1Q9GZQ6 430 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 NAA50Q9GZZ1 169 aaKnown RBP12.63□□□□□ -0.39
SKA2-209ENST00000583976 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 SERTAD4Q9NUC0 356 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 DAPK2Q9UIK4 370 aa12.63□□□□□ -0.39
SKA2-209ENST00000583976 RYR3Q15413 4870 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 NOTOA8MTQ0 251 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 TMEM14DPA8MWL7 114 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 AIPO00170 330 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 PLA2G7Q13093 441 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 TMEM95Q3KNT9 176 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 FBLN7Q53RD9 439 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 KRBOX4Q5JUW0 171 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 CCBE1Q6UXH8 406 aaPredicted RBP12.62□□□□□ -0.39
SKA2-209ENST00000583976 CYYR1Q96J86 154 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 MMP28Q9H239 520 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 PEX16Q9Y5Y5 336 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 DNAH9Q9NYC9 4486 aa12.62□□□□□ -0.39
SKA2-209ENST00000583976 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 FBXO24O75426 580 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 RAB13P51153 203 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 P2RX3P56373 397 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 VBP1P61758 197 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 NCS1P62166 190 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 RPS27AP62979 156 aaKnown RBP12.61□□□□□ -0.39
SKA2-209ENST00000583976 NKAPLQ5M9Q1 402 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 TRAPPC6BQ86SZ2 158 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 PLPPR1Q8TBJ4 325 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 COQ2Q96H96 371 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 BARHL1Q9BZE3 327 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 IFT22Q9H7X7 185 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 RAB18Q9NP72 206 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 TCF19Q9Y242 345 aa12.61□□□□□ -0.39
SKA2-209ENST00000583976 DSCAML1Q8TD84 2053 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 A0A1W2PPH5 198 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 hADV38S2A0JD32 116 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 UBE2QL1A1L167 161 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 FUOMA2VDF0 154 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 CSN2P05814 226 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
SKA2-209ENST00000583976 DLX6P56179 175 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 MEF2CQ06413 473 aaPredicted RBP12.6□□□□□ -0.39
SKA2-209ENST00000583976 AANATQ16613 207 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 IDNKQ5T6J7 187 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 SIGIRRQ6IA17 410 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 RAB12Q6IQ22 244 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 C11orf88Q6PI97 169 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 Q6ZS46 218 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 TCF23Q7RTU1 214 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 CITED2Q99967 270 aaPredicted RBP12.6□□□□□ -0.39
SKA2-209ENST00000583976 LPAR5Q9H1C0 372 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 SCOCQ9UIL1 159 aa12.6□□□□□ -0.39
SKA2-209ENST00000583976 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 A0A0A6YYD4 124 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A10PA6NDY2 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A18PA6NE21 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A16PA6NEW6 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A20PA6NIJ5 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A8PA6NJQ4 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A7PA6NKC0 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A22PA8MWA6 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A12PA8MX19 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A5PA8MXJ8 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A23PA8MXZ1 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 SOCS1O15524 211 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms