RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PPIAL4GP0DN37 164 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 IGHV4-31P0DP07 118 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 CCL3L1P16619 93 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 GLP1RP43220 463 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 MRPS15P82914 257 aaKnown RBP7.85□□□□□ -1.15
RFFL-210ENST00000582308 C17orf58Q2M2W7 97 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 LINC01356Q8N9X3 169 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 SETD6Q8TBK2 473 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 MRGPRDQ8TDS7 321 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 SMIM4Q8WVI0 70 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 FCAMRQ8WWV6 532 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 S100ZQ8WXG8 99 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 MSI2Q96DH6 328 aaKnown RBP7.85□□□□□ -1.15
RFFL-210ENST00000582308 ST6GALNAC5Q9BVH7 336 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 LPAR3Q9UBY5 353 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 MTFP1Q9UDX5 166 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 ANAPC10Q9UM13 185 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 UBE2J1Q9Y385 318 aaPredicted RBP7.85□□□□□ -1.15
RFFL-210ENST00000582308 LINC00312Q9Y6C7 94 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
RFFL-210ENST00000582308 KIR2DS1A0A191URI9 304 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 A0A1W2PQ09 198 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 B4DSR2 109 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 C12orf77C9JDV5 145 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 C15orf65H3BRN8 121 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 SMAD7O15105 426 aaKnown RBP7.84□□□□□ -1.15
RFFL-210ENST00000582308 ENSAO43768 121 aaKnown RBP7.84□□□□□ -1.15
RFFL-210ENST00000582308 MMP23AO75900 390 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 LIPFP07098 398 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 MSMBP08118 114 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 SCTP09683 121 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 ZNF728P0DKX0 622 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 NAT1P18440 290 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 GZMHP20718 246 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 SSTR5P35346 364 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 CBX5P45973 191 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 ERVFRD-1P60508 538 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 MRPS10P82664 201 aaKnown RBP7.84□□□□□ -1.15
RFFL-210ENST00000582308 HMGN3Q15651 99 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 SRSF7Q16629 238 aaKnown RBP eCLIP7.84□□□□□ -1.15
RFFL-210ENST00000582308 Q6ZS49 121 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 MOB1BQ7L9L4 216 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 HOGA1Q86XE5 327 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 LYSMD2Q8IV50 215 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 Q8N402 240 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 C11orf42Q8N5U0 333 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 GDPD1Q8N9F7 314 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 ZNF565Q8N9K5 539 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 OR1L1Q8NH94 360 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 RFESDQ8TAC1 157 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 UBALD1Q8TB05 177 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 SNAPC3Q92966 411 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 LINC00574Q9H8X3 128 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 TAF9BQ9HBM6 251 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 IFT46Q9NQC8 304 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 TAS2R3Q9NYW6 316 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 CALYQ9NYX4 217 aa7.84□□□□□ -1.15
RFFL-210ENST00000582308 RBMX2Q9Y388 322 aaKnown RBP7.84□□□□□ -1.15
RFFL-210ENST00000582308 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 KBTBD11-OT1A0A1B0GTJ5 212 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ZNF729A6NN14 1252 aaPredicted RBP7.83□□□□□ -1.16
RFFL-210ENST00000582308 C17orf98A8MV24 154 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 TRDCB7Z8K6 153 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 NPIPB11E5RHQ5 1161 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 J3QRK9 145 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ORC5O43913 435 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 RBBP9O75884 186 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 HBZP02008 142 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 GSTT2P0CG29 244 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 GSTT2BP0CG30 244 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 GDNFP39905 211 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 GZMKP49863 264 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 PPP5CP53041 499 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ARF6P62330 175 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 HLA-DRB3P79483 266 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ZNF846Q147U1 533 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 BAK1Q16611 211 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 C6orf183Q5T699 404 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 OR52W1Q6IF63 320 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 FAM53AQ6NSI3 398 aaPredicted RBP7.83□□□□□ -1.16
RFFL-210ENST00000582308 SPNS3Q6ZMD2 512 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ZNF554Q86TJ5 538 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 Q8N7P7 452 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 BEST4Q8NFU0 473 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 TRIM63Q969Q1 353 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ARL11Q969Q4 196 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 COX4I2Q96KJ9 171 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ZNF714Q96N38 554 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 TSC22D3Q99576 134 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 THAP7Q9BT49 309 aaPredicted RBP7.83□□□□□ -1.16
RFFL-210ENST00000582308 ZNF286AQ9HBT8 521 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 KCNIP1Q9NZI2 227 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 ONECUT1Q9UBC0 465 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 OPN4Q9UHM6 478 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 INSIG2Q9Y5U4 225 aa7.83□□□□□ -1.16
RFFL-210ENST00000582308 IGKV1-6A0A0C4DH72 117 aa7.82□□□□□ -1.16
RFFL-210ENST00000582308 F2RL2O00254 374 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms