RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 RBP4P02753 201 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 LPLP06858 475 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 MSMBP08118 114 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 FCGR3AP08637 254 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 PPIAL4GP0DN37 164 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 GZMHP20718 246 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 GATA3P23771 443 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 LCN2P80188 198 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 CR1LQ2VPA4 569 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 OLFML2AQ68BL7 652 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZNF880Q6PDB4 577 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 BTNL3Q6UXE8 466 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 SPNS3Q6ZMD2 512 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 TRAPPC6BQ86SZ2 158 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 SNX29P2Q8IUI4 249 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 FAM185AQ8N0U4 392 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 FGFRL1Q8N441 504 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 KIR3DL3Q8N743 410 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 DTX3Q8N9I9 347 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 OR4M2Q8NGB6 313 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 MRPL30Q8TCC3 161 aaKnown RBP9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 DYRK2Q92630 601 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 KCNIP1Q9NZI2 227 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 V9GYH0 126 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 TEX15Q9BXT5 2789 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 ABCA2Q9BZC7 2435 aa9.24□□□□□ -0.93
TRAPPC8-204ENST00000578252 YLPM1P49750 1951 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 KIR2DS1A0A191URI9 304 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZNF729A6NN14 1252 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 C22orf46C9J442 243 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 GABARAPH6UMI1 98 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ORC5O43913 435 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 RPLP1P05386 114 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 IGHV4-31P0DP07 118 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 GLP1RP43220 463 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 KIR2DS4P43632 304 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ACTBP60709 375 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ACTG1P63261 375 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 PAX2Q02962 417 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 SSBP1Q04837 148 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 KIR2DS1Q14954 304 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 Q6ZS49 121 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 GLCCI1Q86VQ1 547 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 TPRX1Q8N7U7 411 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 OR4K15Q8NH41 348 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 GPX8Q8TED1 209 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 SMIM4Q8WVI0 70 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 NUDCD2Q8WVJ2 157 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 FCAMRQ8WWV6 532 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZNF714Q96N38 554 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ABHD1Q96SE0 405 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 HDHD3Q9BSH5 251 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 WDR12Q9GZL7 423 aaKnown RBP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZNF286AQ9HBT8 521 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 IFT46Q9NQC8 304 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
TRAPPC8-204ENST00000578252 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 M0R1W7 72 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 SPINT2O43291 252 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 GSTZ1O43708 216 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 SSX5O60225 188 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 DIRAS3O95661 229 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 ZNF728P0DKX0 622 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 RCVRNP35243 200 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 DVL1P1P54792 670 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 HLA-DRB3P79483 266 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 PYDC2Q56P42 97 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 CYB5R2Q6BCY4 276 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 C1orf122Q6ZSJ8 110 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 HOGA1Q86XE5 327 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 GDPD1Q8N9F7 314 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 OR10A7Q8NGE5 316 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 SETD6Q8TBK2 473 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 MRGPRDQ8TDS7 321 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 CCDC107Q8WV48 283 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 DACT3Q96B18 629 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 TMEM186Q96B77 213 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 LINC00574Q9H8X3 128 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 LPAR2Q9HBW0 351 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 Q9N2K0 584 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 AKIP1Q9NQ31 210 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 ELF5Q9UKW6 265 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 ANAPC10Q9UM13 185 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 KPTNQ9Y664 436 aa9.22□□□□□ -0.93
TRAPPC8-204ENST00000578252 KBTBD11-OT1A0A1B0GTJ5 212 aa9.21□□□□□ -0.94
TRAPPC8-204ENST00000578252 TRDCB7Z8K6 153 aa9.21□□□□□ -0.94
TRAPPC8-204ENST00000578252 J3QLI3 93 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms