RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ZFC3H1O60293 1989 aaKnown RBP9.41□□□□□ -0.9
SEC22B-201ENST00000578049 CDK2AP1O14519 115 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 CCL7P80098 99 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 GABRA6Q16445 453 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 WDR74Q6RFH5 385 aaPredicted RBP9.41□□□□□ -0.9
SEC22B-201ENST00000578049 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 RASL10BQ96S79 203 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 TBX15Q96SF7 602 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 LAMB2P55268 1798 aa9.41□□□□□ -0.9
SEC22B-201ENST00000578049 SPAG17Q6Q759 2223 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 ACTL6AO96019 429 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 MPLP40238 635 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 RBM11P57052 281 aaKnown RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 RFESDQ8TAC1 157 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 OR2H1Q9GZK4 316 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 FAM60AQ9NP50 221 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 KCNK7Q9Y2U2 307 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 NPIPB13A6NJU9 1138 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 NPIPB4C9JG80 1138 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 NPIPB9F8W1W9 429 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 NPY1RP25929 384 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 LSM11P83369 360 aaKnown RBP eCLIP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 FAM209BQ5JX69 171 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 MOB3BQ86TA1 216 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 ADAT3Q96EY9 351 aaPredicted RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 GCM2O75603 506 aaPredicted RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 FCGR3AP08637 254 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 KLF3P57682 345 aaPredicted RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 SELENOTP62341 195 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 RPL24P83731 157 aaKnown RBP9.4□□□□□ -0.9
SEC22B-201ENST00000578049 DMRTC1Q5HYR2 192 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 OR2Y1Q8NGV0 311 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 AQP3Q92482 292 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 TREM2Q9NZC2 230 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 SHISA8B8ZZ34 492 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 RBP4P02753 201 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 FAM157CP0CG43 387 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 PLPPR5Q32ZL2 321 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 C1QL3Q5VWW1 255 aa9.4□□□□□ -0.9
SEC22B-201ENST00000578049 APCSP02743 223 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 COL8A1P27658 744 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 RNF122Q9H9V4 155 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 SRSF10O75494 262 aaKnown RBP9.4□□□□□ -0.91
SEC22B-201ENST00000578049 TMIGD3P0DMS9 266 aaPredicted RBP9.4□□□□□ -0.91
SEC22B-201ENST00000578049 LAIR2Q6ISS4 152 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 OR1P1Q8NH06 330 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 MRGPRDQ8TDS7 321 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 PIPOXQ9P0Z9 390 aa9.4□□□□□ -0.91
SEC22B-201ENST00000578049 ASCC3Q8N3C0 2202 aaKnown RBP9.4□□□□□ -0.91
SEC22B-201ENST00000578049 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PRSS1P07477 247 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 LDLRAD3Q86YD5 345 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TLNRD1Q9H1K6 362 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 DOCK1Q14185 1865 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 SEC16AO15027 2179 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TRBV9A0A0B4J1U6 114 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 A8MWL6 223 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PDCD1Q15116 288 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PRF1P14222 555 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 RPS11P62280 158 aaKnown RBP eCLIP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PAPPAQ13219 1627 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 ZNF880Q6PDB4 577 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PQLC2Q6ZP29 291 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 ZAR1Q86SH2 424 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM116Q8NCL8 245 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 PTPMT1Q8WUK0 201 aaPredicted RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 MRGPRFQ96AM1 343 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TM4SF19Q96DZ7 209 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 WDR54Q9H977 334 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 SPINK4O60575 86 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 UCP3P55916 312 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
SEC22B-201ENST00000578049 C16orf82Q7Z2V1 217 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 ZFP30Q9Y2G7 519 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 NHSL1Q5SYE7 1610 aa9.39□□□□□ -0.91
SEC22B-201ENST00000578049 ECM29Q5VYK3 1845 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 KCNAB3O43448 404 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 UPK3AO75631 287 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 MYOGP15173 224 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 GCSHP23434 173 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 TMEM108Q6UXF1 575 aa9.38□□□□□ -0.91
SEC22B-201ENST00000578049 C5orf17Q8NAS9 161 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms