RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 LPCAT4Q643R3 524 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 Q8NFD4 153 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 OR10AC1Q8NH08 325 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 NEK7Q8TDX7 302 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 Q96MT0 163 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 DPCDQ9BVM2 203 aaPredicted RBP11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 JAM3Q9BX67 310 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 METTL9Q9H1A3 318 aa11.18□□□□□ -0.62
SMARCD2-205ENST00000577686 DNAH3Q8TD57 4116 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 J3QRE1 110 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 SDCBPO00560 298 aaPredicted RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 ZNF780AO75290 641 aaPredicted RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 OR7C1O76099 320 aaPredicted RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 HTR3BO95264 441 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 RPLP1P05386 114 aaKnown RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 LUMP51884 338 aaPredicted RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 PPP3R1P63098 170 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 DUX3Q96PT4 197 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 IFT22Q9H7X7 185 aa11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 EXOGQ9Y2C4 368 aaKnown RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
SMARCD2-205ENST00000577686 SAC3D1A6NKF1 404 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 GABRPO00591 440 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 ORC5O43913 435 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 ATP5HO75947 161 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 LY86O95711 162 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 OR8U8P0C7N1 319 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 CHATP28329 748 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 SOX6P35712 828 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 REG1BP48304 166 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 PIGYQ3MUY2 71 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 NHLRC3Q5JS37 347 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 RNF152Q8N8N0 203 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 SUMF2Q8NBJ7 301 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 PLPPR1Q8TBJ4 325 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 PRR25Q96S07 402 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 S1PR3Q99500 378 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 SPACA1Q9HBV2 294 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 ST3GAL6Q9Y274 331 aa11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 LSM4Q9Y4Z0 139 aaKnown RBP11.16□□□□□ -0.62
SMARCD2-205ENST00000577686 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 SPINT2O43291 252 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 IGHG4P01861 327 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 RBM11P57052 281 aaKnown RBP11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 GPR176Q14439 515 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 DEFB136Q30KP8 78 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 UTF1Q5T230 341 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 C6orf183Q5T699 404 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 TRAT1Q6PIZ9 186 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 Q8N6K4 173 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 Q8N9W7 124 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 OR51A2Q8NGJ7 313 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 OR52N1Q8NH53 320 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 GPR148Q8TDV2 347 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 RTN4IP1Q8WWV3 396 aaPredicted RBP11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 LGALS12Q96DT0 336 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 GFOD1Q9NXC2 390 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 IL36GQ9NZH8 169 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 ING4Q9UNL4 249 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 SMAD5-AS1Q9Y6J3 95 aa11.15□□□□□ -0.62
SMARCD2-205ENST00000577686 A0A1W2PPE3 182 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 AIPO00170 330 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 RAB40BQ12829 278 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 LHFPL3Q86UP9 236 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 OR10K1Q8NGX5 313 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 PDCD1LG2Q9BQ51 273 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 TMEM138Q9NPI0 162 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 GMPPBQ9Y5P6 360 aa11.14□□□□□ -0.63
SMARCD2-205ENST00000577686 COL7A1Q02388 2944 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 IGF1P05019 195 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 GTF2F2P13984 249 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 SOX2P48431 317 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 ALDH3A2P51648 485 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 DDI2Q5TDH0 399 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 ASCL4Q6XD76 172 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 ZNF429Q86V71 674 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 TAS2R4Q9NYW5 299 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 CKLFQ9UBR5 152 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 VSIG4Q9Y279 399 aa11.13□□□□□ -0.63
SMARCD2-205ENST00000577686 ERGIC3Q9Y282 383 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms