RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ZFAND6Q6FIF0 208 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 LAMTOR1Q6IAA8 161 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SPNS3Q6ZMD2 512 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SSX6Q7RTT6 188 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 TCF23Q7RTU1 214 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 VN1R4Q7Z5H5 301 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 COMTD1Q86VU5 262 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 LRRC6Q86X45 466 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 C10orf107Q8IVU9 208 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 HS3ST5Q8IZT8 346 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 Q8NDZ9 215 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 OR11L1Q8NGX0 322 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 FAM45AQ8TCE6 357 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 KCTD4Q8WVF5 259 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 OR5P3Q8WZ94 311 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 RORBQ92753 470 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 APOBEC3DQ96AK3 386 aaPredicted RBP0.78□□□□□ -2.28
TOP2A-202ENST00000577541 CCDC124Q96CT7 223 aaKnown RBP0.78□□□□□ -2.28
TOP2A-202ENST00000577541 CYTH2Q99418 400 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 PITX2Q99697 317 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 FAAP24Q9BTP7 215 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 INIPQ9NRY2 104 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 SLC23A2Q9UGH3 650 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 MTCH2Q9Y6C9 303 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 PRR14LQ5THK1 2151 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 CLUHO75153 1309 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 POLR3AO14802 1390 aaPredicted RBP0.78□□□□□ -2.28
TOP2A-202ENST00000577541 KIAA0232Q92628 1395 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 PLCH2O75038 1416 aa0.78□□□□□ -2.28
TOP2A-202ENST00000577541 VWDEQ8N2E2 1590 aa0.78□□□□□ -2.29
TOP2A-202ENST00000577541 CACNA1SQ13698 1873 aa0.78□□□□□ -2.29
TOP2A-202ENST00000577541 KMT2EQ8IZD2 1858 aa0.78□□□□□ -2.29
TOP2A-202ENST00000577541 HSBP1L1C9JCN9 74 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 K7ERS5 55 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 RGS5O15539 181 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 COCHO43405 550 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 SLC37A4O43826 429 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 PSIP1O75475 530 aaKnown RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 ZNF189O75820 626 aaPredicted RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 FADS2O95864 444 aaKnown RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 PDYNP01213 254 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 LTAP01374 205 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 IGHV3-53P01767 116 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 HLA-AP01891 365 aaKnown RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 SCGB1C2P0DMR2 95 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 ADORA1P30542 326 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 UGT2B10P36537 528 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 PSMD8P48556 350 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 LINC00313P59037 77 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 DSTNP60981 165 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 FLOT2Q14254 428 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 OR4D1Q15615 310 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 C10orf91Q5T1B1 145 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 SPATA31B1PQ5VZV4 182 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 EBLN2Q6P2I7 272 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 OLIG3Q7RTU3 272 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 LY6G5BQ8NDX9 201 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 OR5D18Q8NGL1 313 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 OR9I1Q8NGQ6 314 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 ANGPTL6Q8NI99 470 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 DYNC2LI1Q8TCX1 351 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 SCGB1C1Q8TD33 95 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 DDIT4LQ96D03 193 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 ZNF514Q96K75 400 aaPredicted RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 C1orf50Q9BV19 199 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 API5Q9BZZ5 524 aaKnown RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 OR52A5Q9H2C5 316 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 ZNF286AQ9HBT8 521 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 TAS2R1Q9NYW7 299 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 CD300AQ9UGN4 299 aa0.77□□□□□ -2.29
TOP2A-202ENST00000577541 TRPM3Q9HCF6 1732 aaPredicted RBP0.77□□□□□ -2.29
TOP2A-202ENST00000577541 CEP170Q5SW79 1584 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 ZBED9Q6R2W3 1325 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 TRAV8-2A0A0B4J237 113 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 A0A1W2PRG6 482 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 VPS37CA5D8V6 355 aaPredicted RBP0.76□□□□□ -2.29
TOP2A-202ENST00000577541 CD300LBA8K4G0 201 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 TOR1AO14656 332 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 POP7O75817 140 aaKnown RBP0.76□□□□□ -2.29
TOP2A-202ENST00000577541 SNAP29O95721 258 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 SOD1P00441 154 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 PSMB6P28072 239 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 CRABP2P29373 138 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 KDELR2P33947 212 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 RPA3P35244 121 aaPredicted RBP0.76□□□□□ -2.29
TOP2A-202ENST00000577541 HTR2BP41595 481 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 CD151P48509 253 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 DAPP51397 102 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 UBE2G2P60604 165 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 TRDNQ13061 729 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 SKP2Q13309 424 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 MMDQ15546 238 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 OR8G1Q15617 311 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 BCL2A1Q16548 175 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 ZCWPW2Q504Y3 356 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 NIPAL1Q6NVV3 410 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 MRPL52Q86TS9 123 aaKnown RBP0.76□□□□□ -2.29
TOP2A-202ENST00000577541 DOLPP1Q86YN1 238 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 ZNF567Q8N184 647 aa0.76□□□□□ -2.29
TOP2A-202ENST00000577541 TMEM75Q8N9X5 138 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms