RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CALYQ9NYX4 217 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 NUP50Q9UKX7 468 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
RPAIN-217ENST00000575711 HIVEP2P31629 2446 aa11.46□□□□□ -0.58
RPAIN-217ENST00000575711 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 ORC5O43913 435 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 FSHBP01225 129 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 APOA1P02647 267 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 GSTP1P09211 210 aaKnown RBP11.45□□□□□ -0.58
RPAIN-217ENST00000575711 CD3GP09693 182 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 HOXB4P17483 251 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-217ENST00000575711 CDK2P24941 298 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 SSTR5P35346 364 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 DLX1P56177 255 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 SCGB2A2Q13296 93 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 ARFRP1Q13795 201 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 PRAMEF5Q5TYX0 476 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 OLFML2AQ68BL7 652 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 HEPN1Q6WQI6 88 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-217ENST00000575711 MOB1BQ7L9L4 216 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 SETD6Q8TBK2 473 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 RAB9BQ9NP90 201 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPAIN-217ENST00000575711 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
RPAIN-217ENST00000575711 KCNIP1Q9NZI2 227 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 KCNK7Q9Y2U2 307 aa11.45□□□□□ -0.58
RPAIN-217ENST00000575711 ANK3Q12955 4377 aaKnown RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 RNASEK-C17orf49H0YIS7 233 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 XRCC3O43542 346 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 HPGDSO60760 199 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 NAPSAO96009 420 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 EIF4EP06730 217 aaKnown RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 CGB3P0DN86 165 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 CGB7P0DN87 165 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 OMGP23515 440 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 BPIFB3P59826 476 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 KLRD1Q13241 179 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 OR52W1Q6IF63 320 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 ZNF554Q86TJ5 538 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 PDZD9Q8IXQ8 264 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 OR13D1Q8NGV5 346 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 ARL11Q969Q4 196 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 HDHD3Q9BSH5 251 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 MS4A7Q9GZW8 240 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-217ENST00000575711 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 IDI2-AS1Q9NZ38 188 aa11.44□□□□□ -0.58
RPAIN-217ENST00000575711 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 IGHV1-69DA0A0B4J2H0 117 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 FAM25AB3EWG3 89 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 FAM25CB3EWG5 89 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 FAM25GB3EWG6 89 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 C12orf77C9JDV5 145 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 NPIPB11E5RHQ5 1161 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 C15orf65H3BRN8 121 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 RGS5O15539 181 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 SPINT2O43291 252 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 MMP23AO75900 390 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 IGHV1-69P01742 117 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 FAM157CP0CG43 387 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 EPHA1P21709 976 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 COX7A1P24310 79 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 NFYBP25208 207 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 TALDO1P37837 337 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 MNDAP41218 407 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 UBE2E1P51965 193 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 GNG2P59768 71 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 PITPNAQ00169 270 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 LTC4SQ16873 150 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 ZNF260Q3ZCT1 412 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 TMEM69Q5SWH9 247 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 ZNF880Q6PDB4 577 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 PRR18Q8N4B5 295 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 KIRREL1Q96J84 757 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 TAF9BQ9HBM6 251 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 ADAM30Q9UKF2 790 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 MGAT4AQ9UM21 535 aa11.43□□□□□ -0.58
RPAIN-217ENST00000575711 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
RPAIN-217ENST00000575711 WNK2Q9Y3S1 2297 aa11.42□□□□□ -0.58
RPAIN-217ENST00000575711 TMEM235A6NFC5 223 aa11.42□□□□□ -0.58
RPAIN-217ENST00000575711 HBZP02008 142 aa11.42□□□□□ -0.58
RPAIN-217ENST00000575711 ELK1P19419 428 aa11.42□□□□□ -0.58
RPAIN-217ENST00000575711 FPR2P25090 351 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms