RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 MINOS1Q5TGZ0 78 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 GPR107Q5VW38 600 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 RUSC1-AS1Q66K80 236 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 ZNF626Q68DY1 528 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 HCP5Q6MZN7 132 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 BRICD5Q6PL45 260 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 Q6YL49 198 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 ZNF782Q6ZMW2 699 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-214ENST00000575431 PRIMA1Q86XR5 153 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 LDLRAD3Q86YD5 345 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 PDZD9Q8IXQ8 264 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 BCL6BQ8N143 479 aaPredicted RBP7.8□□□□□ -1.16
CCDC40-214ENST00000575431 PNKDQ8N490 385 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 PIP4P2Q8N4L2 257 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 TMEM86BQ8N661 226 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 OR10R2Q8NGX6 335 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 MRGPRDQ8TDS7 321 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 C22orf15Q8WYQ4 148 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 MALSU1Q96EH3 234 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 KIRREL1Q96J84 757 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 SULT4A1Q9BR01 284 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 ATG5Q9H1Y0 275 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 KCNK15Q9H427 330 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
CCDC40-214ENST00000575431 IDI2-AS1Q9NZ38 188 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 SPATA2Q9UM82 520 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 MINOS1-NBL1R4GNA1 71 aa7.8□□□□□ -1.16
CCDC40-214ENST00000575431 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
CCDC40-214ENST00000575431 NAV3Q8IVL0 2385 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 NSD1Q96L73 2696 aaPredicted RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 A0A0A6YYD4 124 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 TRBV6-6A0A0A6YYG2 114 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 IGHV2-26A0A0B4J1V2 119 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 MEX3AA1L020 520 aaKnown RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 SERPINE3A8MV23 424 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ODF3BA8MYP8 253 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 RAB27BO00194 218 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 TOR1AO14656 332 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 NAPSAO96009 420 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ARG1P05089 322 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CLEC2LP0C7M8 214 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 HTR1DP28221 377 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CEACAM3P40198 252 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 TMBIM6P55061 237 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 TMEM50BP56557 158 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 NCS1P62166 190 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 PITPNAQ00169 270 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 BAMBIQ13145 260 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 KLRD1Q13241 179 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 AANATQ16613 207 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CTF1Q16619 201 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ABHD12Q8N2K0 398 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 SIGLECL1Q8N7X8 197 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 BEND2Q8NDZ0 799 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 OR4K15Q8NH41 348 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 OR9G1Q8NH87 305 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 MRPL30Q8TCC3 161 aaKnown RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CCDC107Q8WV48 283 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 SSMEM1Q8WWF3 244 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ACOT12Q8WYK0 555 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 TMEM158Q8WZ71 300 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 AP3S1Q92572 193 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ARL11Q969Q4 196 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 SLC25A46Q96AG3 418 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ARHGAP5-AS1Q96IT6 56 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CMTM3Q96MX0 182 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CMSS1Q9BQ75 279 aaKnown RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 PECRQ9BY49 303 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 DPAGT1Q9H3H5 408 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 CHMP1AQ9HD42 196 aaPredicted RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 C12orf4Q9NQ89 552 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 DIABLOQ9NR28 239 aa7.79□□□□□ -1.16
CCDC40-214ENST00000575431 SONP18583 2426 aaKnown RBP7.79□□□□□ -1.16
CCDC40-214ENST00000575431 ZANQ9Y493 2812 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 BTBD17A6NE02 478 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 LEUTXA8MZ59 168 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 C15orf65H3BRN8 121 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 F2RL2O00254 374 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 MFNGO00587 321 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 NOL3O60936 208 aaKnown RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 MMP23AO75900 390 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 MELTFP08582 738 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 GSTP1P09211 210 aaKnown RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 CD3GP09693 182 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 SNRPBP14678 240 aaKnown RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 HIST1H1DP16402 221 aaKnown RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 RCC1P18754 421 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 OMGP23515 440 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 NFYBP25208 207 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 SSTR5P35346 364 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 RORCP51449 518 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 ARHGDIBP52566 201 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 EFNB2P52799 333 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 DLX1P56177 255 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 VBP1P61758 197 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 PLAC9Q5JTB6 97 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms