RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 NECAP1Q8NC96 275 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 OR13G1Q8NGZ3 307 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 MCHR1Q99705 422 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 KXD1Q9BQD3 176 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 MMP25Q9NPA2 562 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 JKAMPQ9P055 326 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 GNG13Q9P2W3 67 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 LHX3Q9UBR4 397 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 BOKQ9UMX3 212 aaPredicted RBP6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 B3GALT5Q9Y2C3 310 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 PLXNB2O15031 1838 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 DOCK4Q8N1I0 1966 aa6.9□□□□□ -1.3
TOM1L1-220ENST00000575333 IGLV3-10A0A075B6K4 115 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 A0A0J9YY10 115 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 A0A1B0GX78 115 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 FBLL1A6NHQ2 334 aaKnown RBP6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 RAB29O14966 203 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 ETHE1O95571 254 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 SMIM10L1P0DMW3 83 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 ACRV1P26436 265 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 SOX2P48431 317 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 CD226Q15762 336 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 SRSF7Q16629 238 aaKnown RBP eCLIP6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 PCK2Q16822 640 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF585BQ52M93 769 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 WBP2NLQ6ICG8 309 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 LCNL1Q6ZST4 164 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 LHFPL2Q6ZUX7 228 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 PAQR9Q6ZVX9 377 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 LHFPL1Q86WI0 220 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 FBXL14Q8N1E6 418 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF676Q8N7Q3 588 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 OR5H2Q8NGV7 314 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 OR52E5Q8NH55 327 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 TMEM255BQ8WV15 326 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 MBD3L1Q8WWY6 194 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 SMIM10Q96HG1 83 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 KCNS1Q96KK3 526 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 EFCAB11Q9BUY7 163 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 WDR54Q9H977 334 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 SS18L2Q9UHA2 77 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 WASHC3Q9Y3C0 194 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 HS3ST4Q9Y661 456 aa6.9□□□□□ -1.31
TOM1L1-220ENST00000575333 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 P2RY10O00398 339 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 ST8SIA3O43173 380 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 NGFRP08138 427 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 ADMP35318 185 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 OPRM1P35372 400 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 CCR2P41597 374 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 GFRA1P56159 465 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 TAS2R46P59540 309 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 EWSR1Q01844 656 aaKnown RBP eCLIP6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 EGR4Q05215 589 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 ZP4Q12836 540 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF761Q86XN6 746 aaPredicted RBP6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 OR4N5Q8IXE1 308 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 LGI3Q8N145 548 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 UBE2E3Q969T4 207 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 ADOQ96SZ5 270 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 CHRDL1Q9BU40 450 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 CALHM2Q9HA72 323 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 NPVFQ9HCQ7 196 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 NRN1Q9NPD7 142 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 THYN1Q9P016 225 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 MCTS1Q9ULC4 181 aaKnown RBP6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 BRCA2P51587 3418 aa6.89□□□□□ -1.31
TOM1L1-220ENST00000575333 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 ANKRD66B4E2M5 251 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 H0YJW9 148 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 UPK3AO75631 287 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 IGHG4P01861 327 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 HPNP05981 417 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 PSG2P11465 335 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 MDH2P40926 338 aaKnown RBP6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 REG1BP48304 166 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 LHX2P50458 406 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 LINC00310P59036 64 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 PLCXD2Q0VAA5 305 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 ZNF74Q16587 644 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 C1orf100Q5SVJ3 147 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 Q6ZSR6 202 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 TMEM123Q8N131 208 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 BLNKQ8WV28 456 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 TMEM45BQ96B21 275 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 WDR34Q96EX3 536 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 ULBP2Q9BZM5 246 aa6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
TOM1L1-220ENST00000575333 PDFQ9HBH1 243 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms