RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 LRBAP50851 2863 aa11.38□□□□□ -0.59
CCDC40-209ENST00000573474 DSCAMO60469 2012 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 TRAV6A0A075B6T7 132 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 DIRAS3O95661 229 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 NDUFB7P17568 137 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 GZMHP20718 246 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 EDDM3BP56851 147 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 CARTPTQ16568 116 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 CR1LQ2VPA4 569 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 TMEM155Q4W5P6 130 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 IGSF11Q5DX21 431 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 LHFPL1Q86WI0 220 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 ZNF565Q8N9K5 539 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 OR13C8Q8NGS7 320 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 GIMAP1Q8WWP7 306 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-209ENST00000573474 CABLES2Q9BTV7 478 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 C20orf85Q9H1P6 137 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 OR6C3Q9NZP0 311 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 MIOXQ9UGB7 285 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 OPN4Q9UHM6 478 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
CCDC40-209ENST00000573474 IGKV1-6A0A0C4DH72 117 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 C12orf77C9JDV5 145 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 DVL1O14640 695 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 ARPC1BO15143 372 aaKnown RBP11.36□□□□□ -0.59
CCDC40-209ENST00000573474 BET1O15155 118 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 DHFRP00374 187 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 FCGR2CP31995 323 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 ECI1P42126 302 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 GPR6P46095 362 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-209ENST00000573474 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-209ENST00000573474 C5orf24Q7Z6I8 188 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 ZDHHC22Q8N966 263 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 OR13A1Q8NGR1 328 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 MRGPRDQ8TDS7 321 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 KIRREL1Q96J84 757 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 BARX1Q9HBU1 254 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-209ENST00000573474 FLVCR2Q9UPI3 526 aa11.36□□□□□ -0.59
CCDC40-209ENST00000573474 UTP20O75691 2785 aaKnown RBP11.35□□□□□ -0.59
CCDC40-209ENST00000573474 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 TRGV10A0A0A0MS01 117 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 TRBV6-7A0A0A0MS04 114 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 hADV38S2A0JD32 116 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 SPINT2O43291 252 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 PEX14O75381 377 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 IGHV4-39P01824 125 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 HBZP02008 142 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 PAX1P15863 534 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 NPY4RP50391 375 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 RAB25P57735 213 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 MEF2CQ06413 473 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-209ENST00000573474 AADACL3Q5VUY0 350 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 PRR18Q8N4B5 295 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 OR10J5Q8NHC4 309 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 IL1F10Q8WWZ1 152 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 CORO2AQ92828 525 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 ARL11Q969Q4 196 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 GALMQ96C23 342 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 DCTN5Q9BTE1 182 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 RAB9BQ9NP90 201 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 LPAR3Q9UBY5 353 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-209ENST00000573474 TENM4Q6N022 2769 aa11.35□□□□□ -0.59
CCDC40-209ENST00000573474 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 GPR37O15354 613 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 TUSC2O75896 110 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 RLN1P04808 185 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 CGB3P0DN86 165 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 CGB7P0DN87 165 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 RPS2P15880 293 aaKnown RBP11.34□□□□□ -0.59
CCDC40-209ENST00000573474 NFYAP23511 347 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-209ENST00000573474 FPR2P25090 351 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 IL2RGP31785 369 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 PDLIM4P50479 330 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
CCDC40-209ENST00000573474 HERV-K104P61576 105 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-209ENST00000573474 NLRC3Q7RTR2 1065 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 OR8B3Q8NGG8 313 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 MARCH1Q8TCQ1 289 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 MARVELD3Q96A59 401 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 NEIL1Q96FI4 390 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-209ENST00000573474 OR8B2Q96RD0 313 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 LIME1Q9H400 295 aa11.34□□□□□ -0.59
CCDC40-209ENST00000573474 VSIG4Q9Y279 399 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms