RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SIGLEC9Q9Y336 463 aa5.99□□□□□ -1.45
NUP88-205ENST00000572809 MEIKINA0A087WXM9 373 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TRAV24A0A0B4J272 114 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TRBV5-5A0A0J9YX44 114 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 A0A1W2PPK0 400 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 A6NDX4 124 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 ZNF729A6NN14 1252 aaPredicted RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 LEUTXA8MZ59 168 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 HSPB6O14558 160 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TOR1AO14656 332 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 CHST1O43916 411 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TMEM127O75204 238 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PLA2G1BP04054 148 aaKnown RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 CGB3P0DN86 165 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 CGB7P0DN87 165 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 IGFBP3P17936 291 aaPredicted RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 CELP19835 753 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 OR3A4PP47883 348 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PRRX1P54821 245 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TAS2R43P59537 309 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 RPS11P62280 158 aaKnown RBP eCLIP5.98□□□□□ -1.45
NUP88-205ENST00000572809 RIPK1Q13546 671 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 IL13RA2Q14627 380 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 ATXN7L3Q14CW9 347 aaPredicted RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 C17orf58Q2M2W7 97 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PAN3Q58A45 887 aaKnown RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 DDI2Q5TDH0 399 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PRAMEF5Q5TYX0 476 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 C11orf88Q6PI97 169 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 BAIAP2L2Q6UXY1 529 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 Q6ZTK2 550 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 AHSA2Q719I0 299 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 OSR2Q8N2R0 312 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 NANOGP1Q8N7R0 232 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 ZFP41Q8N8Y5 198 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 NUDT10Q8NFP7 164 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 OR13C5Q8NGS8 318 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 ZNF596Q8TC21 504 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TFAP2CQ92754 450 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 NUDT11Q96G61 164 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PGLYRP3Q96LB9 341 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 NKX3-1Q99801 234 aaPredicted RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 NPFFR1Q9GZQ6 430 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PPIL3Q9H2H8 161 aaKnown RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 NCOR1P1Q9H4R4 102 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 PAK1IP1Q9NWT1 392 aaPredicted RBP5.98□□□□□ -1.45
NUP88-205ENST00000572809 CKLFQ9UBR5 152 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 KIF25Q9UIL4 384 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 TCF19Q9Y242 345 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 ST3GAL6Q9Y274 331 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 DSCAML1Q8TD84 2053 aa5.98□□□□□ -1.45
NUP88-205ENST00000572809 A0A087X0M5 115 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 KBTBD11-OT1A0A1B0GTJ5 212 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 PNMA8CA0A1B0GUJ8 204 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 A0A1B0GX30 115 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 FAM172BPA6NC97 362 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 FAM90A22PA8MWA6 464 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 PTGES3LE9PB15 166 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 F2RL2O00254 374 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 MYL12BO14950 172 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 ZNF780AO75290 641 aaPredicted RBP5.97□□□□□ -1.45
NUP88-205ENST00000572809 IGLV1-47P01700 117 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 CD1AP06126 327 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 SERPINA2P20848 420 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 NFYBP25208 207 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 CD34P28906 385 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 BRS3P32247 399 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 CEACAM3P40198 252 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 KCNJ3P48549 501 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 EFNB2P52799 333 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 WNT4P56705 351 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 BDH1Q02338 343 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 GPR176Q14439 515 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 HERPUD1Q15011 391 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 PIGYQ3MUY2 71 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 TMEM219Q86XT9 240 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 CDH26Q8IXH8 852 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 SUMF2Q8NBJ7 301 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 OR4P4Q8NGL7 312 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 OR13A1Q8NGR1 328 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 PLPPR1Q8TBJ4 325 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 CREB3L1Q96BA8 519 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 ZNF184Q99676 751 aaPredicted RBP5.97□□□□□ -1.45
NUP88-205ENST00000572809 DPCDQ9BVM2 203 aaPredicted RBP5.97□□□□□ -1.45
NUP88-205ENST00000572809 PRSS22Q9GZN4 317 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 MMP27Q9H306 513 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 ZNF286AQ9HBT8 521 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 FKBP14Q9NWM8 211 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 IL36GQ9NZH8 169 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 NKX1-2Q9UD57 310 aaPredicted RBP5.97□□□□□ -1.45
NUP88-205ENST00000572809 FOXJ3Q9UPW0 622 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 ERGIC3Q9Y282 383 aa5.97□□□□□ -1.45
NUP88-205ENST00000572809 KIAA2026Q5HYC2 2103 aa5.96□□□□□ -1.45
NUP88-205ENST00000572809 MGAM2Q2M2H8 2515 aa5.96□□□□□ -1.45
NUP88-205ENST00000572809 TRAV8-7A0A075B6U6 113 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 TRBV5-7A0A0A0MS05 114 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 LY6LH3BQJ8 138 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 BUB1B-PAK6H3BSN5 160 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 GEMIN2O14893 280 aaKnown RBP5.96□□□□□ -1.46
NUP88-205ENST00000572809 OR7C1O76099 320 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms