RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 EML6Q6ZMW3 1958 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 IGKV1D-13A0A0B4J2D9 117 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 CD300LBA8K4G0 201 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 PGLYRP1O75594 196 aaPredicted RBP9.23□□□□□ -0.93
CCDC40-207ENST00000572253 IGKV1-13P0DP09 117 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 FAM180AQ6UWF9 173 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 Q6ZPA2 131 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 ZNF383Q8NA42 475 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 Q8NFD4 153 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 OR2Y1Q8NGV0 311 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 OR10J5Q8NHC4 309 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 FGFBP3Q8TAT2 258 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 GPHA2Q96T91 129 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 H3BP45 60 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 MRPL33O75394 65 aaKnown RBP9.23□□□□□ -0.93
CCDC40-207ENST00000572253 B3GALT5-AS1P59052 145 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 CD81P60033 236 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 HBG1P69891 147 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 HBG2P69892 147 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 PYY3Q5JQD4 70 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 CDCP2Q5VXM1 449 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 OR51H1Q8NH63 302 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
CCDC40-207ENST00000572253 CISD1Q9NZ45 108 aaKnown RBP9.23□□□□□ -0.93
CCDC40-207ENST00000572253 NOSIPQ9Y314 301 aaKnown RBP9.23□□□□□ -0.93
CCDC40-207ENST00000572253 REV3LO60673 3130 aa9.23□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 TMEM50AO95807 157 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 TRGC2P03986 189 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 BCL2P10415 239 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 SLC25A6P12236 298 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 TMEM267Q0VDI3 215 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 C9orf152Q5JTZ5 239 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HIPK2Q9H2X6 1198 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 RBM7Q9Y580 266 aaKnown RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 PTBP3O95758 552 aaKnown RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 IGHEP01854 428 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 LCN15Q6UWW0 184 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 LILRB2Q8N423 598 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 HLA-HP01893 362 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 GDF1P27539 372 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 NTF4P34130 210 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CEACAM21Q3KPI0 293 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 NRN1LQ496H8 165 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 WIPI1Q5MNZ9 446 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 GGNQ86UU5 652 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 IFI44Q8TCB0 444 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CLDN23Q96B33 292 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 GPR146Q96CH1 333 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CALHM2Q9HA72 323 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 OR2W1Q9Y3N9 320 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 LY6G6EA0A0G2JKS1 128 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CYB5R3P00387 301 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 IGHV3-9P01782 118 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 LINC00596Q86U02 117 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 PLPPR1Q8TBJ4 325 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-207ENST00000572253 TAAR3PQ9P1P4 343 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 U3KQA8 63 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CACNA1EQ15878 2313 aa9.22□□□□□ -0.93
CCDC40-207ENST00000572253 CEP192Q8TEP8 1941 aa9.21□□□□□ -0.93
CCDC40-207ENST00000572253 RANBP2P49792 3224 aaKnown RBP9.21□□□□□ -0.93
CCDC40-207ENST00000572253 MMP7P09237 267 aaPredicted RBP9.21□□□□□ -0.93
CCDC40-207ENST00000572253 ARF1P84077 181 aaKnown RBP9.21□□□□□ -0.93
CCDC40-207ENST00000572253 SPNS3Q6ZMD2 512 aa9.21□□□□□ -0.93
CCDC40-207ENST00000572253 TMEM242Q9NWH2 141 aa9.21□□□□□ -0.93
CCDC40-207ENST00000572253 RNF115Q9Y4L5 304 aa9.21□□□□□ -0.93
CCDC40-207ENST00000572253 OR5H1A6NKK0 313 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 OPN1MWP04001 364 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 OPN1MW2P0DN77 364 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 OPN1MW3P0DN78 364 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 HERPUD1Q15011 391 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 PDZD11Q5EBL8 140 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 ZNF468Q5VIY5 522 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-207ENST00000572253 GTF3AQ92664 365 aaKnown RBP9.21□□□□□ -0.94
CCDC40-207ENST00000572253 P2RX4Q99571 388 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 PSMG3Q9BT73 122 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-207ENST00000572253 CABLES2Q9BTV7 478 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
CCDC40-207ENST00000572253 CTDSP1Q9GZU7 261 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 PSENENQ9NZ42 101 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 C5orf49A4QMS7 147 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 CEBPZOSA8MTT3 80 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 SYNGR2O43760 224 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 CYTIPO60759 359 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 PAX9P55771 341 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 ABHD3Q8WU67 409 aa9.21□□□□□ -0.94
CCDC40-207ENST00000572253 PINX1Q96BK5 328 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms