RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 EDARQ9UNE0 448 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 PROCRQ9UNN8 238 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 PSG11Q9UQ72 335 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 HEXAP06865 529 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 PSG2P11465 335 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 CLDN18P56856 261 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 FOXO1Q12778 655 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 ZNF529Q6P280 563 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 LIAT1Q6ZQX7 453 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 CISD2Q8N5K1 135 aaKnown RBP13.9□□□□□ -0.18
RAB40B-206ENST00000571995 SARAFQ96BY9 339 aa13.9□□□□□ -0.18
RAB40B-206ENST00000571995 IGKV1D-13A0A0B4J2D9 117 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 TTLL8A6PVC2 850 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 SH2D1BO14796 132 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 IGKV1-13P0DP09 117 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 CD37P11049 281 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 RAB2AP61019 212 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF818PQ6ZRF7 136 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 SLC2A8Q9NY64 477 aa13.9□□□□□ -0.19
RAB40B-206ENST00000571995 CFAP47Q6ZTR5 3102 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 SHOXO15266 292 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 SNAPINO95295 136 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 PPP1CCP36873 323 aaKnown RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 NKX6-1P78426 367 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 PDZD11Q5EBL8 140 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 ABHD14BQ96IU4 210 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 OPA3Q9H6K4 179 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 MALRD1Q5VYJ5 2156 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 TRAV17A0A0B4J275 112 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 TNRC18O15417 2968 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 CD8AP01732 235 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 HOXD4P09016 255 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 HKR1P10072 659 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 RPL23AP62750 156 aaKnown RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 EIF3IQ13347 325 aaKnown RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 HIST3H3Q16695 136 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 FAHD2BQ6P2I3 314 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF709Q8N972 641 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF610Q8N9Z0 462 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 FAHD2AQ96GK7 314 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 UQCC1Q9NVA1 299 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 LPAR3Q9UBY5 353 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 MMP24Q9Y5R2 645 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 A0A1W2PNU3 283 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 CRYAAP02489 173 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 SNRPCP09234 159 aaKnown RBP13.89□□□□□ -0.19
RAB40B-206ENST00000571995 RD3LP0DJH9 198 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 SLC25A4P12235 298 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 CRYGSP22914 178 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 GNG10P50151 68 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 PJVKQ0ZLH3 352 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 GLRX5Q86SX6 157 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 ABHD14AQ9BUJ0 271 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
RAB40B-206ENST00000571995 TNCP24821 2201 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 ATMQ13315 3056 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF724A8MTY0 619 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 CLPPQ16740 277 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-206ENST00000571995 SOHLH1Q5JUK2 328 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 HSD17B13Q7Z5P4 300 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-206ENST00000571995 OR2C3Q8N628 320 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 UMAD1C9J7I0 102 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 SNAPC5O75971 98 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 FBP1P09467 338 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 LINC00205P59089 165 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 PRB3Q04118 309 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-206ENST00000571995 OR5H1A6NKK0 313 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 IFNA10P01566 189 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 FOXF2Q12947 444 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 KCNMB1Q16558 191 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 Q3ZCU0 254 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 POC1AQ8NBT0 407 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 LRRC29Q8WV35 223 aa13.88□□□□□ -0.19
RAB40B-206ENST00000571995 CST4P01036 141 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 IFNA4P05014 189 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 RPS10P46783 165 aaKnown RBP13.87□□□□□ -0.19
RAB40B-206ENST00000571995 RAB11AP62491 216 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 SPRR3Q9UBC9 169 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 DYNLT3P51808 116 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 TPPPO94811 219 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 H2AFB1P0C5Y9 115 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 RSRP1Q9BUV0 290 aa13.87□□□□□ -0.19
RAB40B-206ENST00000571995 CRYM-AS1A6NIL9 109 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 FGF2P09038 288 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 HNF1AP20823 631 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 GUK1Q16774 197 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF718Q3SXZ3 478 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 LHFPL5Q8TAF8 219 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 HPSE2Q8WWQ2 592 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 REG4Q9BYZ8 158 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 CENPEQ02224 2701 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 ST8SIA5O15466 376 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 BAXQ07812 192 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 RCC2Q9P258 522 aaKnown RBP13.86□□□□□ -0.19
RAB40B-206ENST00000571995 ZNF107Q9UII5 783 aaPredicted RBP13.86□□□□□ -0.19
RAB40B-206ENST00000571995 POLDIP2Q9Y2S7 368 aa13.86□□□□□ -0.19
RAB40B-206ENST00000571995 CCDC168Q8NDH2 2452 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms