RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 LCNL1Q6ZST4 164 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 WFDC3Q8IUB2 231 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 OR6V1Q8N148 313 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 PARP16Q8N5Y8 322 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 ZFP41Q8N8Y5 198 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 TMEM116Q8NCL8 245 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 OR5L1Q8NGL2 311 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 ACOT12Q8WYK0 555 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 AP3S1Q92572 193 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 TMEM203Q969S6 136 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 PPP1R14BQ96C90 147 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 SMIM19Q96E16 107 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 SEH1LQ96EE3 360 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 ABHD1Q96SE0 405 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 CCDC32Q9BV29 185 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 C6orf62Q9GZU0 229 aaPredicted RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 OR10A2Q9H208 303 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 HEXA-AS1Q9H8Q6 139 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 RPRD1BQ9NQG5 326 aaKnown RBP5.39□□□□□ -1.55
CHD3-213ENST00000571249 SNTG1Q9NSN8 517 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 COPS3Q9UNS2 423 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 B9D1Q9UPM9 204 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 TMEM14AQ9Y6G1 99 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 SESN1Q9Y6P5 492 aa5.39□□□□□ -1.55
CHD3-213ENST00000571249 A0A1W2PRG6 482 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CXorf65A6NEN9 183 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 PRR32B1ATL7 298 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 H3BSH0 61 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 AP4M1O00189 453 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 XKRYO14609 159 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CDK2AP2O75956 126 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 OR2C1O95371 312 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 UCHL1P09936 223 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 NDUFB7P17568 137 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CA6P23280 308 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CRABP1P29762 137 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 PYCR1P32322 319 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 NAA10P41227 235 aaPredicted RBP5.38□□□□□ -1.55
CHD3-213ENST00000571249 OR3A4PP47883 348 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 DAP3P51398 398 aaKnown RBP5.38□□□□□ -1.55
CHD3-213ENST00000571249 DYNLT3P51808 116 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 ZNF134P52741 427 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 RPS11P62280 158 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHD3-213ENST00000571249 TP53I3Q53FA7 332 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 SPANXN2Q5MJ10 180 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 SLC25A47Q6Q0C1 308 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 LINC00346Q8IVM7 164 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 FAM185AQ8N0U4 392 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CENPSQ8N2Z9 138 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 ZBTB8BQ8NAP8 495 aaPredicted RBP5.38□□□□□ -1.55
CHD3-213ENST00000571249 OR5T2Q8NGG2 359 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 OR51L1Q8NGJ5 315 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 OR8U1Q8NH10 309 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 OTOSQ8NHW6 89 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 CAPSLQ8WWF8 208 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 ASB10Q8WXI3 467 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 ASB17Q8WXJ9 295 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 GHSRQ92847 366 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 ST6GALNAC6Q969X2 333 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 MALSU1Q96EH3 234 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 INTS14Q96SY0 518 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 TBX5Q99593 518 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 SDHCQ99643 169 aaPredicted RBP5.38□□□□□ -1.55
CHD3-213ENST00000571249 ATF6BQ99941 703 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 TMED9Q9BVK6 235 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 SYT4Q9H2B2 425 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 MIXL1Q9H2W2 232 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 MRM2Q9UI43 246 aaKnown RBP5.38□□□□□ -1.55
CHD3-213ENST00000571249 V9GYH0 126 aa5.38□□□□□ -1.55
CHD3-213ENST00000571249 TRBV5-5A0A0J9YX44 114 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 OR4C45A6NMZ5 311 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 A8MZ25 164 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 SGCEO43556 437 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 ARL6IP5O75915 188 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 PTBP3O95758 552 aaKnown RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 HLA-DQB1P01920 261 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 TFF1P04155 84 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 MUC1P15941 1255 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 CTLA4P16410 223 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 AZGP1P25311 298 aaKnown RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 MAPK3P27361 379 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 GUCA1AP43080 201 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 HCCSP53701 268 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 FAM3BP58499 235 aaPredicted RBP5.37□□□□□ -1.55
CHD3-213ENST00000571249 PPP3R1P63098 170 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 KIR2DS1Q14954 304 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 ZNF79Q15937 498 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 ACSM3Q53FZ2 586 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 YIF1BQ5BJH7 314 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 KRBOX4Q5JUW0 171 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 LDLRAD2Q5SZI1 272 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 DDI2Q5TDH0 399 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 DNM1P34Q6PK57 102 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 DEGS2Q6QHC5 323 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 HDDC2Q7Z4H3 204 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 ZNF429Q86V71 674 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 NR2C2APQ86WQ0 139 aa5.37□□□□□ -1.55
CHD3-213ENST00000571249 SGPP2Q8IWX5 399 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms