RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PRR25Q96S07 402 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ASCL2Q99929 193 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 MCRIP2Q9BUT9 160 aaKnown RBP6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 JAM3Q9BX67 310 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 DCLRE1BQ9H816 532 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 LINC00574Q9H8X3 128 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZFP57Q9NU63 452 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 FAM118AQ9NWS6 357 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 ST3GAL6Q9Y274 331 aa6.77□□□□□ -1.33
CTDNEP1-203ENST00000570385 TMEM30CPA0ZSE6 113 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 H0YHG0 523 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 SERPINA2P20848 420 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 GPR12P47775 334 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 ALDH3A2P51648 485 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 PNLIPRP3Q17RR3 467 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 CXorf66Q5JRM2 361 aaPredicted RBP6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 DDI2Q5TDH0 399 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 TEX38Q6PEX7 206 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 Q8N9W7 124 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR13C5Q8NGS8 318 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR2T10Q8NGZ9 312 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR52N1Q8NH53 320 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 CYYR1Q96J86 154 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC29A1Q99808 456 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 HSPB9Q9BQS6 159 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 NCOR1P1Q9H4R4 102 aa6.76□□□□□ -1.33
CTDNEP1-203ENST00000570385 MAGEA13PA6NCF6 341 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 AP4M1O00189 453 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 MPZL2O60487 215 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ATP5HO75947 161 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 CSTBP04080 98 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 LIMS3P0CW19 117 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 LIMS4P0CW20 117 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC2A2P11168 524 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 GZMHP20718 246 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF93P35789 620 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ECI1P42126 302 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 F2RL1P55085 397 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 RBM11P57052 281 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF816Q0VGE8 651 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 GPR50Q13585 617 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 EBI3Q14213 229 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 SMN1Q16637 294 aaKnown RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC22A6Q4U2R8 563 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR2G6Q5TZ20 316 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF529Q6P280 563 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ASCL4Q6XD76 172 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 C5orf24Q7Z6I8 188 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 TGIF2LXQ8IUE1 241 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 COMMD1Q8N668 190 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 Q8NFD4 153 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR10A7Q8NGE5 316 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR4K15Q8NH41 348 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 RHOXF1Q8NHV9 184 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 GPR148Q8TDV2 347 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 APH1BQ8WW43 257 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 TMEM106AQ96A25 262 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 CPNE2Q96FN4 548 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 S100A13Q99584 98 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 METTL9Q9H1A3 318 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 PLSCR3Q9NRY6 295 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 GFOD1Q9NXC2 390 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
CTDNEP1-203ENST00000570385 STAB2Q8WWQ8 2551 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 LOC100130705A0A1B0GUX0 176 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 A0A1W2PPK0 400 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 SEC14L6B5MCN3 397 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 AIPO00170 330 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 DYNC1I1O14576 645 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 MOSP00540 346 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 MT-ND4P03905 459 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 CD2P06729 351 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 MYF6P23409 242 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 BDKRB2P30411 391 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 KCNJ3P48549 501 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 ETV1P50549 477 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF134P52741 427 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 PPP3R1P63098 170 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 RAB40BQ12829 278 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 MRPL28Q13084 256 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 NKAPLQ5M9Q1 402 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 SYT6Q5T7P8 510 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC16A12Q6ZSM3 486 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 IZUMO1Q8IYV9 350 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 Q8N6K4 173 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZFP41Q8N8Y5 198 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 TMEM104Q8NE00 496 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR5M8Q8NGP6 311 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR1L1Q8NH94 360 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 RTN4IP1Q8WWV3 396 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 ST6GALNAC6Q969X2 333 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 Q96MT0 163 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR5B12Q96R08 314 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 MYCBPQ99417 103 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms