RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 DNAH2Q9P225 4427 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 TRAV24A0A0B4J272 114 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 H0YJX3 145 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 ARPC1BO15143 372 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 ATF1P18846 271 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 ACTR3P61158 418 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 CDK5Q00535 292 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 RAB40BQ12829 278 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 MMDQ15546 238 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 ECSCRQ19T08 205 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 PAN3Q58A45 887 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 HSP90B2PQ58FF3 399 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 CEMP1Q6PRD7 247 aaPredicted RBP7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR5D18Q8NGL1 313 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 PLPPR1Q8TBJ4 325 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 ADAT3Q96EY9 351 aaPredicted RBP7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 RITA1Q96K30 269 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 BARHL1Q9BZE3 327 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 REEP1Q9H902 201 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 MED4Q9NPJ6 270 aa7.92□□□□□ -1.14
CTDNEP1-202ENST00000570380 SLC31A2O15432 143 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 ATP8B1O43520 1251 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 PRKACBP22694 351 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 NDPQ00604 133 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 EWSR1Q01844 656 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 TMEM236Q5W0B7 351 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR2T5Q6IEZ7 315 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 C8orf31Q8N9H6 132 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 CCDC54Q8NEL0 328 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR2T29Q8NH02 315 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 UBALD1Q8TB05 177 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 PP6455Q8WZ26 134 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 C10orf35Q96D05 121 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 RHOVQ96L33 236 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 OPALINQ96PE5 141 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 CNN2Q99439 309 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 ADI1Q9BV57 179 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 ANKRD60Q9BZ19 345 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 RHOFQ9HBH0 211 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 SLC25A19Q9HC21 320 aa7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 FOXA2Q9Y261 457 aaPredicted RBP7.91□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGHV3-43A0A0B4J1X8 118 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 C15orf65H3BRN8 121 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 SDCBPO00560 298 aaPredicted RBP7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 TXNL1O43396 289 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 CNIH1O95406 144 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 IGHV3-43DP0DP04 118 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 MED14OSP0DP75 135 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 IL3RAP26951 378 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 ZNF137PP52743 207 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 CRIP2P52943 208 aaPredicted RBP7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 CD81P60033 236 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 PAX5Q02548 391 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 KLF5Q13887 457 aaPredicted RBP7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 LRRC36Q1X8D7 754 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 LGALS9CQ6DKI2 356 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 LCN12Q6JVE5 192 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 UTS2BQ765I0 119 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 SSX6Q7RTT6 188 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 TMEM179BQ7Z7N9 219 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 SLC35F2Q8IXU6 374 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 RDH10Q8IZV5 341 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 PRSS35Q8N3Z0 413 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 DEFB125Q8N687 156 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR52M1Q8NGK5 317 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 OR9G4Q8NGQ1 327 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 CNIH3Q8TBE1 160 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 GIPC3Q8TF64 312 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 SPSB1Q96BD6 273 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 MS4A10Q96PG2 267 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 ADGRL4Q9HBW9 690 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 GFOD1Q9NXC2 390 aa7.9□□□□□ -1.14
CTDNEP1-202ENST00000570380 LOC107986453A0A1B0GWG9 222 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 CCDC22O60826 627 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 TPPPO94811 219 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 APOL3O95236 402 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 EGR2P11161 476 aaPredicted RBP7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 OSMP13725 252 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 ZNF134P52741 427 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 ACTBP60709 375 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 LSAMPQ13449 338 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 C5orf64Q2M2E5 130 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 LIN54Q6MZP7 749 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 FAHD1Q6P587 224 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 CYP2R1Q6VVX0 501 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 SLC25A48Q6ZT89 311 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 SAXO1Q8IYX7 474 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 Q8N402 240 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 ZNF439Q8NDP4 499 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 RGP1Q92546 391 aaPredicted RBP7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 FGGYQ96C11 551 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 NR1H4Q96RI1 486 aaPredicted RBP7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 NEURL2Q9BR09 285 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 OVOL2Q9BRP0 275 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 WFDC10AQ9H1F0 79 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 NEK6Q9HC98 313 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 FAM118AQ9NWS6 357 aa7.89□□□□□ -1.15
CTDNEP1-202ENST00000570380 TVP23BQ9NYZ1 205 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms