RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 IL15RAQ13261 267 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 SLC10A1Q14973 349 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 MKXQ8IYA7 352 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 DDA1Q9BW61 102 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
LINC00558-201ENST00000569422 NBEAQ8NFP9 2946 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 CD300LBA8K4G0 201 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 WISP2O76076 250 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 IGHV2-70P01814 119 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 MUC1P15941 1255 aaPredicted RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 NDUFB7P17568 137 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 NFYBP25208 207 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 GNRHRP30968 328 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 SOX8P57073 446 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ETFRF1Q6IPR1 90 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 SHISA2Q6UWI4 295 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 LIAT1Q6ZQX7 453 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 SPRY4Q9C004 299 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ESRP2Q9H6T0 727 aaKnown RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 GLS2Q9UI32 602 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 RCL1Q9Y2P8 373 aaKnown RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 PQLC2LA1A4F0 135 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 NKX2-6A6NCS4 301 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ITGB1BP1O14713 200 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 CA11O75493 328 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 TK1P04183 234 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 EPHA1P21709 976 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ECI1P42126 302 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ERVS71-1P61550 626 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 NAAAQ02083 359 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 EIF3IQ13347 325 aaKnown RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 DAZAP2Q15038 168 aaPredicted RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 MST1LQ2TV78 715 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 RNFT1Q5M7Z0 435 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 P4HA3Q7Z4N8 544 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 TBC1D26Q86UD7 250 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 LDLRAD3Q86YD5 345 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF695Q8IW36 515 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 GAPTQ8N292 157 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 APOBEC3DQ96AK3 386 aaPredicted RBP7.5□□□□□ -1.21
LINC00558-201ENST00000569422 SH3BGRL3Q9H299 93 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 CCL28Q9NRJ3 127 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 PCDHB16Q9NRJ7 776 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 AMDHD2Q9Y303 409 aa7.5□□□□□ -1.21
LINC00558-201ENST00000569422 IGKV1D-13A0A0B4J2D9 117 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 FAM24AA6NFZ4 105 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CRYABP02511 175 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CELA3BP08861 270 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 OR8U9P0C7N5 309 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 IGKV1-13P0DP09 117 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 NPBWR1P48145 328 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 RAB13P51153 203 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CCL11P51671 97 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 PJVKQ0ZLH3 352 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 IZUMO4Q1ZYL8 232 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 KRTAP27-1Q3LI81 207 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 ASCL4Q6XD76 172 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF818PQ6ZRF7 136 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MYPOPQ86VE0 399 aaPredicted RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 LGI3Q8N145 548 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SVBPQ8N300 66 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM217Q8N7C4 229 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 OR8U1Q8NH10 309 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 OR51H1Q8NH63 302 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 ADAMTS17Q8TE56 1095 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 GPR87Q9BY21 358 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 UQCC1Q9NVA1 299 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 DNAJB11Q9UBS4 358 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 RBM7Q9Y580 266 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 ANKRD30BLA7E2S9 258 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 KLRC4-KLRK1H3BQV0 150 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 RPL36A-HNRNPH2H7BZ11 118 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MPPED1O15442 326 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 LYZL6O75951 148 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CST4P01036 141 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 PPT1P50897 306 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 IDH3GP51553 393 aaPredicted RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MRPL49Q13405 166 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CEACAM21Q3KPI0 293 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 EIF5AL1Q6IS14 154 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 C20orf204Q6ZNR8 217 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 BHLHA15Q7RTS1 189 aaPredicted RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SSX9Q7RTT3 188 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MDP1Q86V88 176 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CXorf67Q86X51 503 aaPredicted RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM45BQ96B21 275 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MOB3AQ96BX8 217 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MSI2Q96DH6 328 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF251Q9BRH9 671 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 WFDC1Q9HC57 220 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MMP26Q9NRE1 261 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 GVINP1Q7Z2Y8 2422 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CACNA1GO43497 2377 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 IGKV3D-15A0A087WSY6 115 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM238C9JI98 176 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SSSCA1O60232 199 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 CTXN2P0C2S0 81 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms