RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 FAM216AQ8WUB2 273 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 ZFAND2BQ8WV99 257 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 GCDHQ92947 438 aaPredicted RBP10.42□□□□□ -0.74
CDT1-203ENST00000569140 LEAP2Q969E1 77 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 CYYR1Q96J86 154 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 SULT4A1Q9BR01 284 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 FAAP24Q9BTP7 215 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 TM2D1Q9BX74 207 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 LPAR5Q9H1C0 372 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 ZNF286AQ9HBT8 521 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 KCNIP1Q9NZI2 227 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 DAPK2Q9UIK4 370 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
CDT1-203ENST00000569140 A0A075B6Q4 140 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 A0A0A6YYD4 124 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 NOTOA8MTQ0 251 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 ODF3BA8MYP8 253 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 H3BUX3 64 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 SDCBPO00560 298 aaPredicted RBP10.41□□□□□ -0.74
CDT1-203ENST00000569140 SOCS1O15524 211 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 MT-ND4P03905 459 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
CDT1-203ENST00000569140 CLEC2LP0C7M8 214 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 CD37P11049 281 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 GZMHP20718 246 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 CHATP28329 748 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 IER3P46695 156 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 PAX5Q02548 391 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 PLA2G7Q13093 441 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 SSX2Q16385 188 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 C6orf183Q5T699 404 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 ZNF626Q68DY1 528 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 RTN4RL2Q86UN3 420 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 TPRA1Q86W33 373 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 NR2C2APQ86WQ0 139 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 OR11H6Q8NGC7 330 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 OR56B1Q8NGI3 324 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 YIPF6Q96EC8 236 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 KIRREL1Q96J84 757 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 SSX3Q99909 188 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 CHIAQ9BZP6 476 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 NCOR1P1Q9H4R4 102 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 ABCB10Q9NRK6 738 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 RAB22AQ9UL26 194 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 TBL2Q9Y4P3 447 aaKnown RBP10.41□□□□□ -0.74
CDT1-203ENST00000569140 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
CDT1-203ENST00000569140 IGHV3-43A0A0B4J1X8 118 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 SPINT2O43291 252 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 CA11O75493 328 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 GLAP06280 429 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 SMIM18P0DKX4 95 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 IGHV3-43DP0DP04 118 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 JUNBP17275 347 aaPredicted RBP10.4□□□□□ -0.74
CDT1-203ENST00000569140 HTR1DP28221 377 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 TGFBR1P36897 503 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 PRRX1P54821 245 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 MRPS15P82914 257 aaKnown RBP10.4□□□□□ -0.74
CDT1-203ENST00000569140 LY6EQ16553 131 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 LRRC75BQ2VPJ9 315 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 IDNKQ5T6J7 187 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 SFXN4Q6P4A7 337 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 C16orf87Q6PH81 154 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 BEND2Q8NDZ0 799 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 MRPS26Q9BYN8 205 aaKnown RBP10.4□□□□□ -0.74
CDT1-203ENST00000569140 ATG5Q9H1Y0 275 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 RAB9BQ9NP90 201 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 POMT1Q9Y6A1 747 aa10.4□□□□□ -0.74
CDT1-203ENST00000569140 A0A1W2PPE3 182 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 C12orf77C9JDV5 145 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 CLDN34H7C241 214 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 ORC5O43913 435 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
CDT1-203ENST00000569140 RCC1P18754 421 aaPredicted RBP10.39□□□□□ -0.75
CDT1-203ENST00000569140 EFNB2P52799 333 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 MINOS1Q5TGZ0 78 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 TRAT1Q6PIZ9 186 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 C12orf54Q6X4T0 127 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 Q6ZTK2 550 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 OR10V1Q8NGI7 309 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 OR5R1Q8NH85 324 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 MRPL30Q8TCC3 161 aaKnown RBP10.39□□□□□ -0.75
CDT1-203ENST00000569140 LGALS14Q8TCE9 139 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 TAF15Q92804 592 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDT1-203ENST00000569140 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 FUNDC2Q9BWH2 189 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 PECRQ9BY49 303 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 GNG12Q9UBI6 72 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 AMMECR1Q9Y4X0 333 aaPredicted RBP10.39□□□□□ -0.75
CDT1-203ENST00000569140 MINOS1-NBL1R4GNA1 71 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 MXRA5Q9NR99 2828 aa10.39□□□□□ -0.75
CDT1-203ENST00000569140 METTL21EPA6NDL7 271 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms