RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	PAN3	Q58A45	887 aa	Known RBP	11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LIAT1	Q6ZQX7	453 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF826P	Q6ZT77	177 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	FAM169B	Q8N8A8	192 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CCDC71L	Q8N9Z2	235 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	PLPPR1	Q8TBJ4	325 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	S100PBP	Q96BU1	408 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SUCNR1	Q9BXA5	334 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CXXC4	Q9H2H0	198 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TUBG2	Q9NRH3	451 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MEMO1	Q9Y316	297 aa		11.25	□□□□□ -0.61
ZNRF1-208	ENST00000568494	INTS1	Q8N201	2190 aa	Known RBP	11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SHANK1	Q9Y566	2161 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TRAV39	A0A0B4J263	110 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	IGKV1D-13	A0A0B4J2D9	117 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	PHF1	O43189	567 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TUSC2	O75896	110 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CTXN2	P0C2S0	81 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	IGKV1-13	P0DP09	117 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	GCH1	P30793	250 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	PRAMEF6	Q5VXH4	476 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LYZL2	Q7Z4W2	148 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	GLYATL2	Q8WU03	294 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SECTM1	Q8WVN6	248 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MSI2	Q96DH6	328 aa	Known RBP	11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	C18orf12	Q96KH6	178 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ARPC5L	Q9BPX5	153 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MSL2	Q9HCI7	577 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	COL6A6	A6NMZ7	2263 aa		11.24	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MSGN1	A6NI15	193 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494		F5H0A9	414 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494		M0R1B8	84 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MPPED1	O15442	326 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ATF4	P18848	351 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CEACAM8	P31997	349 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	HOXA4	Q00056	320 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	NAAA	Q02083	359 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF146	Q15072	292 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SPIN3	Q5JUX0	258 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MBNL2	Q5VZF2	373 aa	Known RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	FOXRED2	Q8IWF2	684 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LRTM2	Q8N967	370 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF565	Q8N9K5	539 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494		Q8NA96	180 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TP53RK	Q96S44	253 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SLC5A7	Q9GZV3	580 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	NBAS	A2RRP1	2371 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SH2D1B	O14796	132 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	WNT9B	O14905	357 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ACAA1	P09110	424 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CEBPD	P49716	269 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	HLA-DRB3	P79483	266 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SNTB1	Q13884	538 aa	Known RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF273	Q14593	569 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MSMP	Q1L6U9	139 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TIMM23B	Q5SRD1	257 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF818P	Q6ZRF7	136 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LGI3	Q8N145	548 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CISD2	Q8N5K1	135 aa	Known RBP	11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	HES4	Q9HCC6	221 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TAS2R3	Q9NYW6	316 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	RELN	P78509	3460 aa		11.23	□□□□□ -0.61
ZNRF1-208	ENST00000568494	C3orf85	A0A1B0GTC6	90 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494		H7C1Q1	480 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	HSD17B6	O14756	317 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	HAND1	O96004	215 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	MDH2	P40926	338 aa	Known RBP	11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	ZNF497	Q6ZNH5	498 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TBC1D26	Q86UD7	250 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LDLRAD3	Q86YD5	345 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	FAM185A	Q8N0U4	392 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	GAPT	Q8N292	157 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	OR4A4P	Q8NGN8	299 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	KIRREL1	Q96J84	757 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SFXN3	Q9BWM7	321 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CCL28	Q9NRJ3	127 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CYTL1	Q9NRR1	136 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	UFSP2	Q9NUQ7	469 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494	OR14J1	Q9UGF5	321 aa		11.22	□□□□□ -0.61
ZNRF1-208	ENST00000568494		A6NLC8	198 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TRIM77	I1YAP6	450 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	GPR31	O00270	319 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	APOC3	P02656	99 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	RND3	P61587	244 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LRP11	Q86VZ4	500 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	GPHA2	Q96T91	129 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	CABLES2	Q9BTV7	478 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TLNRD1	Q9H1K6	362 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	TREM2	Q9NZC2	230 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	PCDHB10	Q9UN67	800 aa		11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	LSM5	Q9Y4Y9	91 aa	Known RBP	11.21	□□□□□ -0.61
ZNRF1-208	ENST00000568494	SCGB1D2	O95969	90 aa		11.21	□□□□□ -0.62
ZNRF1-208	ENST00000568494	PET100	P0DJ07	73 aa		11.21	□□□□□ -0.62
ZNRF1-208	ENST00000568494	TDGF1P3	P51864	188 aa		11.21	□□□□□ -0.62
ZNRF1-208	ENST00000568494	SHE	Q5VZ18	495 aa		11.21	□□□□□ -0.62
ZNRF1-208	ENST00000568494	MEX3B	Q6ZN04	569 aa	Known RBP	11.21	□□□□□ -0.62
ZNRF1-208	ENST00000568494	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.21	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms