RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 HIST1H2BDP58876 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BCP62807 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST2H2BEQ16778 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 BRICD5Q6PL45 260 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 SLC25A26Q70HW3 274 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 MKXQ8IYA7 352 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 GAPTQ8N292 157 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 NAT6Q93015 286 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BHQ93079 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 LSM10Q969L4 123 aaKnown RBP18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BNQ99877 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 HIST1H2BMQ99879 126 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 BCL2L14Q9BZR8 327 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 MMP24Q9Y5R2 645 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 R4GN57 208 aa18.53■□□□□ 0.56
SPSB3-208ENST00000566339 ASCC3Q8N3C0 2202 aaKnown RBP18.52■□□□□ 0.56
SPSB3-208ENST00000566339 TRBV24-1A0A075B6N3 115 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 CHST1O43916 411 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 MMP7P09237 267 aaPredicted RBP18.52■□□□□ 0.55
SPSB3-208ENST00000566339 SP9P0CG40 484 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 NBL1P41271 181 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 PAX9P55771 341 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 SERF2P84101 59 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 GUSBP11Q6P575 273 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 GFOD1Q9NXC2 390 aa18.52■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF727A8MUV8 499 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 TMEM50AO95807 157 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 OPN1MWP04001 364 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 OPN1MW2P0DN77 364 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 OPN1MW3P0DN78 364 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 OMGP23515 440 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 CD200P41217 278 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 ASCL1P50553 236 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 ERVFRD-1P60508 538 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF600Q6ZNG1 722 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 RPS19BP1Q86WX3 136 aaKnown RBP18.51■□□□□ 0.55
SPSB3-208ENST00000566339 CALHM1Q8IU99 346 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 HIST3H2BBQ8N257 126 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 SUMF1Q8NBK3 374 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 GPR35Q9HC97 309 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 P4HTMQ9NXG6 502 aa18.51■□□□□ 0.55
SPSB3-208ENST00000566339 A0A1B0GV50 99 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 IFNA1P01562 189 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 KLK3P07288 261 aaPredicted RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 BCL2P10415 239 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 EDN3P14138 238 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 B4GALT1P15291 398 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 F2RP25116 425 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 SSTP61278 116 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 PINX1Q96BK5 328 aaKnown RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 FAM210BQ96KR6 192 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 LINC00470Q9BZP3 86 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 PTPRZ1P23471 2315 aaPredicted RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 NPIPB11E5RHQ5 1161 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 GFRA3O60609 400 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 PGLYRP1O75594 196 aaPredicted RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 CNOT4O95628 575 aaKnown RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 IGHEP01854 428 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 DEFA6Q01524 100 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 CEACAM16Q2WEN9 425 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 FAM90A2PQ658T7 463 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 GGNQ86UU5 652 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 SCGB1C1Q8TD33 95 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 ADGRG7Q96K78 797 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 REPIN1Q9BWE0 567 aaKnown RBP18.5■□□□□ 0.55
SPSB3-208ENST00000566339 TAAR3PQ9P1P4 343 aa18.5■□□□□ 0.55
SPSB3-208ENST00000566339 MED19A0JLT2 244 aaPredicted RBP18.49■□□□□ 0.55
SPSB3-208ENST00000566339 C9J4A7 227 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 CST7O76096 145 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 EPHA1P21709 976 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF880Q6PDB4 577 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 MYO7BQ6PIF6 2116 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 AGBL5Q8NDL9 886 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 CABLES2Q9BTV7 478 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 MAGT1Q9H0U3 335 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 CALHM2Q9HA72 323 aa18.49■□□□□ 0.55
SPSB3-208ENST00000566339 CYB5BO43169 146 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 CYTIPO60759 359 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 UMODP07911 640 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 RSPO4Q2I0M5 234 aaPredicted RBP18.48■□□□□ 0.55
SPSB3-208ENST00000566339 CEACAM21Q3KPI0 293 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 ASCL5Q7RTU5 278 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 AGMATQ9BSE5 352 aa18.48■□□□□ 0.55
SPSB3-208ENST00000566339 OR5H1A6NKK0 313 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 SCTP09683 121 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF154Q13106 437 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 TRA2AQ13595 282 aaKnown RBP eCLIP18.47■□□□□ 0.55
SPSB3-208ENST00000566339 HERPUD1Q15011 391 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 DBX2Q6ZNG2 339 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 MRGPRGQ86SM5 289 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF383Q8NA42 475 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 SDF2L1Q9HCN8 221 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 CCL28Q9NRJ3 127 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 EP300Q09472 2414 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-208ENST00000566339 TGIF2-C20orf24A0A0A6YYL0 155 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 KIAA1324LA8MWY0 1029 aaPredicted RBP18.47■□□□□ 0.55
SPSB3-208ENST00000566339 BCL3P20749 454 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 ZNF343Q6P1L6 599 aa18.47■□□□□ 0.55
SPSB3-208ENST00000566339 ZDHHC23Q8IYP9 409 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms