RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ERGIC1Q969X5 290 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 RSRP1Q9BUV0 290 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 NMES1Q9C002 83 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 CHMP1AQ9HD42 196 aaPredicted RBP14.15□□□□□ -0.14
RAB40C-210ENST00000566290 PLSCR3Q9NRY6 295 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 IL36RNQ9UBH0 155 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 WIPI2Q9Y4P8 454 aa14.15□□□□□ -0.14
RAB40C-210ENST00000566290 PIGBOS1A0A0B4J2F0 54 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SLC33A1O00400 549 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-210ENST00000566290 OR2H2O95918 312 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 TK1P04183 234 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 ZNF728P0DKX0 622 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 PGAM2P15259 253 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 AKR1C4P17516 323 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SELENOVP59797 346 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 FAM27E3Q08E93 113 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SMIM21Q3B7S5 101 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 DCAF12L2Q5VW00 463 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 Q71RC1 249 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-210ENST00000566290 KCTD9Q7L273 389 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SGPP2Q8IWX5 399 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 CCDC71LQ8N9Z2 235 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 RNASE6Q93091 150 aaKnown RBP14.14□□□□□ -0.15
RAB40C-210ENST00000566290 DIRC2Q96SL1 478 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SYT3Q9BQG1 590 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 SUCNR1Q9BXA5 334 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 TMEM165Q9HC07 324 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 NGBQ9NPG2 151 aa14.14□□□□□ -0.15
RAB40C-210ENST00000566290 KIAA1324LA8MWY0 1029 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-210ENST00000566290 SRRM5B3KS81 715 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 H0YL77 283 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 B3GALNT1O75752 331 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 PPYP01298 95 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 IFNA2P01563 188 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 NFYAP23511 347 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-210ENST00000566290 FCGR2CP31995 323 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 FABP6P51161 128 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 HERV-K104P61576 105 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 SRPXP78539 464 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 ZNF345Q14585 488 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 LGALSLQ3ZCW2 172 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-210ENST00000566290 PAN3Q58A45 887 aaKnown RBP14.13□□□□□ -0.15
RAB40C-210ENST00000566290 ACP7Q6ZNF0 438 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 DYRK2Q92630 601 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 ZNF488Q96MN9 340 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 FOXC2Q99958 501 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 TOLLIPQ9H0E2 274 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 LIME1Q9H400 295 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 NCOR1P1Q9H4R4 102 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 C1orf123Q9NWV4 160 aa14.13□□□□□ -0.15
RAB40C-210ENST00000566290 COL6A5A8TX70 2615 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 NSD1Q96L73 2696 aaPredicted RBP14.12□□□□□ -0.15
RAB40C-210ENST00000566290 TRBV6-7A0A0A0MS04 114 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 HAND1O96004 215 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 ZNF44P15621 663 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 HMGN3Q15651 99 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 MSMPQ1L6U9 139 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 SLC35E4Q6ICL7 350 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 GSG1LQ6UXU4 331 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 PRIMA1Q86XR5 153 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 LDLRAD3Q86YD5 345 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 LINC01560Q8TB33 94 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 NEK7Q8TDX7 302 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 MRPL24Q96A35 216 aaKnown RBP14.12□□□□□ -0.15
RAB40C-210ENST00000566290 CHIAQ9BZP6 476 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 NAA60Q9H7X0 242 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 HEXA-AS1Q9H8Q6 139 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 ZDHHC8Q9ULC8 765 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 KCNIP3Q9Y2W7 256 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 BOLA1Q9Y3E2 137 aa14.12□□□□□ -0.15
RAB40C-210ENST00000566290 FN1P02751 2386 aaKnown RBP14.12□□□□□ -0.15
RAB40C-210ENST00000566290 VPS13CQ709C8 3753 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 ZSCAN5BA6NJL1 495 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 ATP6V1G2-DDX39BF2Z307 99 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 M0R233 179 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 CD55P08174 381 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 GLRA1P23415 457 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 RBMXP38159 391 aaKnown RBP14.11□□□□□ -0.15
RAB40C-210ENST00000566290 HERPUD1Q15011 391 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 MSMO1Q15800 293 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 ESCO2Q56NI9 601 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 BRICD5Q6PL45 260 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 Q8TCH9 128 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 SMR3AQ99954 134 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 SLC2A9Q9NRM0 540 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 TAAR3PQ9P1P4 343 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 IL19Q9UHD0 177 aa14.11□□□□□ -0.15
RAB40C-210ENST00000566290 TRAV14DV4A0A0A6YYC5 116 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 DUXBA0A1W2PPF3 345 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 TMEM30CPA0ZSE6 113 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 GRPP07492 148 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 LYL1P12980 280 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 AADACP22760 399 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 IL15RAQ13261 267 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 PDCD1Q15116 288 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 H1FOOQ8IZA3 346 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-210ENST00000566290 RDH5Q92781 318 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 MEGF10Q96KG7 1140 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms