RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TRAT1Q6PIZ9 186 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 C6orf201Q7Z4U5 140 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 RTN4RL2Q86UN3 420 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 SSMEM1Q8WWF3 244 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 TMEM158Q8WZ71 300 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 DYRK2Q92630 601 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 SULT4A1Q9BR01 284 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 RAB9BQ9NP90 201 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 MBNL3Q9NUK0 354 aaKnown RBP17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 ZNRD1Q9P1U0 126 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 POMT1Q9Y6A1 747 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 STAB1Q9NY15 2570 aa17.13■□□□□ 0.33
SHCBP1-205ENST00000566016 A0A1W2PRD5 423 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 A0A1W2PRF3 423 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 A0A1W2PRM7 423 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 UBE2QL1A1L167 161 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 SMIM30A4D0T7 59 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 MELTFP08582 738 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 OMGP23515 440 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 SSTR5P35346 364 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 UBA52P62987 128 aaKnown RBP17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 C6orf183Q5T699 404 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 BEND2Q8NDZ0 799 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 AJUBAQ96IF1 538 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 PLEKHJ1Q9NW61 149 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 DAPK2Q9UIK4 370 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 C15orf65H3BRN8 121 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 SOCS1O15524 211 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 PAHP00439 452 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 SLC2A2P11168 524 aaPredicted RBP17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 GDNFP39905 211 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 LGALS4P56470 323 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 MXD1Q05195 221 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 KRTAP24-1Q3LI83 254 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 TMEM30BQ3MIR4 351 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 MINOS1Q5TGZ0 78 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 SLC16A12Q6ZSM3 486 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 CROCCP3Q8IVE0 287 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 FAM216AQ8WUB2 273 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 IDI2-AS1Q9NZ38 188 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 TRAPPC2LQ9UL33 140 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 MINOS1-NBL1R4GNA1 71 aa17.12■□□□□ 0.33
SHCBP1-205ENST00000566016 A0A0B4J203 849 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 NAPSAO96009 420 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 ARG1P05089 322 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 TFAP2AP05549 437 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 ALDH3B2P48448 385 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 VEGFCP49767 419 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 SLC9A3R2Q15599 337 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 AANATQ16613 207 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 ABHD12Q8N2K0 398 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 OR52M1Q8NGK5 317 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 ZNF596Q8TC21 504 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 MRPL30Q8TCC3 161 aaKnown RBP17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 FAAP24Q9BTP7 215 aa17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 RIMS4Q9H426 269 aaPredicted RBP17.11■□□□□ 0.33
SHCBP1-205ENST00000566016 METTL21EPA6NDL7 271 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 POM121CA8CG34 1229 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 HOXA3O43365 443 aaPredicted RBP17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 IGLV1-47P01700 117 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 CLEC2LP0C7M8 214 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 IER3P46695 156 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 EFNB2P52799 333 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 TMEM50BP56557 158 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 SRSF2Q01130 221 aaKnown RBP17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 PLA2G7Q13093 441 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 OR4K15Q8NH41 348 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 MEGF9Q9H1U4 602 aa17.1■□□□□ 0.33
SHCBP1-205ENST00000566016 TRBV6-6A0A0A6YYG2 114 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 TRAV39A0A0B4J263 110 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 RAB27BO00194 218 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 F2RL2O00254 374 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 DYNC1I2Q13409 638 aaKnown RBP17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 BAIAP2L2Q6UXY1 529 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 Q6ZTK2 550 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 MOB1BQ7L9L4 216 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 ANKRD13BQ86YJ7 626 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 OR4P4Q8NGL7 312 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 CCDC107Q8WV48 283 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 ARL11Q969Q4 196 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 MALSU1Q96EH3 234 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 ARHGAP5-AS1Q96IT6 56 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 DPAGT1Q9H3H5 408 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 ZNF286AQ9HBT8 521 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 ETV7Q9Y603 341 aa17.09■□□□□ 0.33
SHCBP1-205ENST00000566016 SPINT2O43291 252 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 SCGNO76038 276 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 GABARAPO95166 117 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 RCC1P18754 421 aaPredicted RBP17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 Q3ZCU0 254 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 PLAC9Q5JTB6 97 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 OR9G1Q8NH87 305 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 RFESDQ8TAC1 157 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 LGALS14Q8TCE9 139 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 C17orf50Q8WW18 174 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 CREB3L1Q96BA8 519 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 CYYR1Q96J86 154 aa17.08■□□□□ 0.32
SHCBP1-205ENST00000566016 C12orf4Q9NQ89 552 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms