RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PHF21AQ96BD5 680 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 FAAP24Q9BTP7 215 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 IDI2-AS1Q9NZ38 188 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 ABRACLQ9P1F3 81 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 DAPK2Q9UIK4 370 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 ETV7Q9Y603 341 aa10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 ANK3Q12955 4377 aaKnown RBP10.27□□□□□ -0.77
SHCBP1-204ENST00000565887 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 TRBV6-6A0A0A6YYG2 114 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A0A6YYH2 397 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 UBE2QL1A1L167 161 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 A6NJ64 397 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 TOR1AO14656 332 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ARG1P05089 322 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 TFAP2AP05549 437 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 SAA4P35542 130 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 CEACAM3P40198 252 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ALDH3B2P48448 385 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 MRPS15P82914 257 aaKnown RBP10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 MXD1Q05195 221 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 DYNC1I2Q13409 638 aaKnown RBP10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 RUSC1-AS1Q66K80 236 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF626Q68DY1 528 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF782Q6ZMW2 699 aaPredicted RBP10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 MOB1BQ7L9L4 216 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 NR2C2APQ86WQ0 139 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 LDLRAD3Q86YD5 345 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 BEND2Q8NDZ0 799 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 OR10R2Q8NGX6 335 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 OR9G1Q8NH87 305 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 MRGPRDQ8TDS7 321 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 FAM216AQ8WUB2 273 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ARL11Q969Q4 196 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 KCTD12Q96CX2 325 aaKnown RBP10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 RAB3CQ96E17 227 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 MBNL3Q9NUK0 354 aaKnown RBP10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF581Q9P0T4 197 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 SCOCQ9UIL1 159 aa10.26□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 BTBD17A6NE02 478 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 SOCS1O15524 211 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 SLC2A2P11168 524 aaPredicted RBP10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 COX7A1P24310 79 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 HTR1DP28221 377 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 RPS19P39019 145 aaKnown RBP10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 ARHGDIBP52566 201 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 TMEM50BP56557 158 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 KLRD1Q13241 179 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 IDNKQ5T6J7 187 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 STEAP3Q658P3 488 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 C8orf31Q8N9H6 132 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 CCDC107Q8WV48 283 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 KIRREL1Q96J84 757 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 BCL7BQ9BQE9 202 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 SULT4A1Q9BR01 284 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 NICN1Q9BSH3 213 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 ATG5Q9H1Y0 275 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 RNF167Q9H6Y7 350 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 CHMP1AQ9HD42 196 aaPredicted RBP10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 SPATA2Q9UM82 520 aa10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 AMMECR1Q9Y4X0 333 aaPredicted RBP10.25□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 MEX3AA1L020 520 aaKnown RBP10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 FOXI3A8MTJ6 420 aaPredicted RBP10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 OOSP1A8MZH6 123 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 C15orf65H3BRN8 121 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 F2RL2O00254 374 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 VENTXO95231 258 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 NAPSAO96009 420 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 NFYBP25208 207 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 IER3P46695 156 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 LSM3P62310 102 aaKnown RBP10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 HTD2P86397 168 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 PITPNAQ00169 270 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 PRAMEF5Q5TYX0 476 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 DTX3Q8N9I9 347 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 OR4K15Q8NH41 348 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 MRPL30Q8TCC3 161 aaKnown RBP10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 GALMQ96C23 342 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 ARHGAP5-AS1Q96IT6 56 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 CMTM3Q96MX0 182 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 ZNF48Q96MX3 618 aaPredicted RBP10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 PECRQ9BY49 303 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 KCNK15Q9H427 330 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 DIABLOQ9NR28 239 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 DPM3Q9P2X0 92 aa10.24□□□□□ -0.77
SHCBP1-204ENST00000565887 ATRQ13535 2644 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
SHCBP1-204ENST00000565887 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms