RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC25A38Q96DW6 304 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 NEURL2Q9BR09 285 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 DNAJB12Q9NXW2 375 aaKnown RBP2.94□□□□□ -1.94
CHD9-213ENST00000564845 IL17BQ9UHF5 180 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 GDF2Q9UK05 429 aaPredicted RBP2.94□□□□□ -1.94
CHD9-213ENST00000564845 PRNDQ9UKY0 176 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 KLF7O75840 302 aaPredicted RBP2.94□□□□□ -1.94
CHD9-213ENST00000564845 OR8U8P0C7N1 319 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 MAS1LP35410 378 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 DLX1P56177 255 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 PPP1CBP62140 327 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 UBE2IP63279 158 aaKnown RBP2.94□□□□□ -1.94
CHD9-213ENST00000564845 IKZF1Q13422 519 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 SFRP5Q5T4F7 317 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 FAM57BQ71RH2 274 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 ACAD8Q9UKU7 415 aa2.94□□□□□ -1.94
CHD9-213ENST00000564845 PINLYPA6NC86 204 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 K7EPK0 472 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 FAM157BP0CG42 384 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 CXCL3P19876 107 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 FPR2P25090 351 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 LINC00205P59089 165 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PLPPR5Q32ZL2 321 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PHYHD1Q5SRE7 291 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 FBXW12Q6X9E4 464 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ACOT7LQ6ZUV0 252 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 BPIFB2Q8N4F0 458 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 OR4S2Q8NH73 311 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 FGFBP3Q8TAT2 258 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ZNF431Q8TF32 576 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 FAM71F1Q96KD3 344 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 OXGR1Q96P68 337 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SIGLEC12Q96PQ1 595 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 TMED7Q9Y3B3 224 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 CEP192Q8TEP8 1941 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 HMSDA8MTL9 139 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 CHST1O43916 411 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 GPR6P46095 362 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 GABRA2P47869 451 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 DGCR2P98153 550 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 FLI1Q01543 452 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 RPL18Q07020 188 aaKnown RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 TESK1Q15569 626 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 H2BFWTQ7Z2G1 175 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 LRTM2Q8N967 370 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 TM4SF19Q96DZ7 209 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 YIPF6Q96EC8 236 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PIGLQ9Y2B2 252 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 GOSR2O14653 212 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 OR13C7P0DN81 318 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 MGMTP16455 207 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 USF1P22415 310 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 CCL11P51671 97 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PMPCAQ10713 525 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 NSUN5P2Q63ZY6 315 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 RASL11AQ6T310 242 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SFXN3Q9BWM7 321 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 GABARAPL3Q9BY60 117 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 C19orf53Q9UNZ5 99 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 POLEQ07864 2286 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 NPIPB6E9PJ23 425 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SDCBPO00560 298 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 TNFSF14O43557 240 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 HLA-DQA1P01909 254 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 RELQ04864 619 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 CCBE1Q6UXH8 406 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 FCRLAQ7L513 359 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 RPRMLQ8N4K4 120 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ARL6IP6Q8N6S5 226 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 OR10P1Q8NGE3 313 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 MRPL30Q8TCC3 161 aaKnown RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 ZNF721Q8TF20 911 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SMIM4Q8WVI0 70 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ZNF385AQ96PM9 386 aaKnown RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 ANGPTL4Q9BY76 406 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PKIBQ9C010 78 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 NOX4Q9NPH5 578 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ZNF319Q9P2F9 582 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 V9GYH0 126 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 EP300Q09472 2414 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 A0A0G2JLM5 398 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SULT1A3P0DMM9 295 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SULT1A4P0DMN0 295 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 WT1P19544 449 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 EMP2P54851 167 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 ERVFRD-1P60508 538 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PDE6HQ13956 83 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 SOHLH1Q5JUK2 328 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 DEFB124Q8NES8 71 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 RTN4IP1Q8WWV3 396 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 ALKBH3Q96Q83 286 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 PMCHL2Q9BQD1 86 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 MFFQ9GZY8 342 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 C11orf54Q9H0W9 315 aaPredicted RBP2.93□□□□□ -1.94
CHD9-213ENST00000564845 TAF9BQ9HBM6 251 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 OOEPA6NGQ2 149 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 P2RY10O00398 339 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 PLCXD3Q63HM9 321 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 CNIH2Q6PI25 160 aa2.93□□□□□ -1.94
CHD9-213ENST00000564845 Q6ZN92 141 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms