RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ARL11Q969Q4 196 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 CLEC7AQ9BXN2 247 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 RIMS4Q9H426 269 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-208ENST00000564703 IDI2-AS1Q9NZ38 188 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 SCOCQ9UIL1 159 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 HSF4Q9ULV5 492 aa13.04□□□□□ -0.32
RAB40C-208ENST00000564703 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-208ENST00000564703 A0A0U1RQK1 487 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 MMP23AO75900 390 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 SNRPBP14678 240 aaKnown RBP13.03□□□□□ -0.32
RAB40C-208ENST00000564703 RPS19P39019 145 aaKnown RBP13.03□□□□□ -0.32
RAB40C-208ENST00000564703 RPL5P46777 297 aaKnown RBP13.03□□□□□ -0.32
RAB40C-208ENST00000564703 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 SERPINB10P48595 397 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 SCAND1P57086 179 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 ARL6IP1Q15041 203 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 LTC4SQ16873 150 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 C17orf58Q2M2W7 97 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 HCP5Q6MZN7 132 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 Q6YL49 198 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 ANKRD13BQ86YJ7 626 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 OR11H6Q8NGC7 330 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 RAB3CQ96E17 227 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 NF1P21359 2839 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
RAB40C-208ENST00000564703 IGHV2-26A0A0B4J1V2 119 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 SCGNO76038 276 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 VBP1P61758 197 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 DYRK2Q92630 601 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 ARHGAP5-AS1Q96IT6 56 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 KIRREL1Q96J84 757 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.33
RAB40C-208ENST00000564703 PECRQ9BY49 303 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 DPAGT1Q9H3H5 408 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 PRDM13Q9H4Q3 707 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 LINC00574Q9H8X3 128 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 ABRACLQ9P1F3 81 aa13.02□□□□□ -0.33
RAB40C-208ENST00000564703 TBL2Q9Y4P3 447 aaKnown RBP13.02□□□□□ -0.33
RAB40C-208ENST00000564703 A0A0A6YYD4 124 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 MDFIC2A0A1B0GVS7 189 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 BTBD17A6NE02 478 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 NPIPB11E5RHQ5 1161 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 VENTXO95231 258 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 SSTR5P35346 364 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 TGFBR1P36897 503 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 EFNB2P52799 333 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 TMEM50BP56557 158 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 NCS1P62166 190 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 PLA2G7Q13093 441 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 SLC16A12Q6ZSM3 486 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 ZNF554Q86TJ5 538 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 GAPTQ8N292 157 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 NDNFQ8TB73 568 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 SSMEM1Q8WWF3 244 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 MALSU1Q96EH3 234 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
RAB40C-208ENST00000564703 ETV7Q9Y603 341 aa13.01□□□□□ -0.33
RAB40C-208ENST00000564703 A0A075B6Q4 140 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 SDCBPO00560 298 aaPredicted RBP13□□□□□ -0.33
RAB40C-208ENST00000564703 CD3GP09693 182 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 RCC1P18754 421 aaPredicted RBP13□□□□□ -0.33
RAB40C-208ENST00000564703 HTR1DP28221 377 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 CEACAM3P40198 252 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 KRTAP21-3Q3LHN1 58 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 MINOS1Q5TGZ0 78 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 ZNF626Q68DY1 528 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 OR52M1Q8NGK5 317 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 OR9G1Q8NH87 305 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 MRPL30Q8TCC3 161 aaKnown RBP13□□□□□ -0.33
RAB40C-208ENST00000564703 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 ZFAND2BQ8WV99 257 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 ZMAT3Q9HA38 289 aaKnown RBP13□□□□□ -0.33
RAB40C-208ENST00000564703 TAF9BQ9HBM6 251 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 DIABLOQ9NR28 239 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 AK3Q9UIJ7 227 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 MGAT4AQ9UM21 535 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 MINOS1-NBL1R4GNA1 71 aa13□□□□□ -0.33
RAB40C-208ENST00000564703 A0A087X0M5 115 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 A0A1B0GX30 115 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 FAM172BPA6NC97 362 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 POM121CA8CG34 1229 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 C12orf77C9JDV5 145 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 RAB27BO00194 218 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 HOXA3O43365 443 aaPredicted RBP12.99□□□□□ -0.33
RAB40C-208ENST00000564703 NOL3O60936 208 aaKnown RBP12.99□□□□□ -0.33
RAB40C-208ENST00000564703 MELTFP08582 738 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 CD34P28906 385 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 TALDO1P37837 337 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 GDNFP39905 211 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 RORCP51449 518 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 SRSF2Q01130 221 aaKnown RBP12.99□□□□□ -0.33
RAB40C-208ENST00000564703 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 TUSC1Q2TAM9 212 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms