RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 MRPS18BQ9Y676 258 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 KCNE3Q9Y6H6 103 aa4.8□□□□□ -1.64
CHD9-210ENST00000564582 YLPM1P49750 1951 aaKnown RBP4.8□□□□□ -1.64
CHD9-210ENST00000564582 A0A0U1RQV5 110 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 A0A1B0GVT2 93 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 PRSS37A4D1T9 235 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 TMEM202A6NGA9 273 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SERINC4A6NH21 518 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 MBD3L5A6NJ08 208 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 ZNF727A8MUV8 499 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 HIDE1A8MVS5 230 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SIRPB1O00241 398 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CDIPTO14735 213 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 TCF21O43680 179 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 RAMP1O60894 148 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 KBTBD11O94819 623 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 NXPH2O95156 264 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 DIRAS3O95661 229 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CSTAP01040 98 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 NRASP01111 189 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 KRASP01116 189 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 PDGFBP01127 241 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 HLA-DQA2P01906 255 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SERPINA7P05543 415 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CTXN2P0C2S0 81 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CTSEP14091 401 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 IRF2P14316 349 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 PSMB5P28074 263 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CST5P28325 142 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 GNRHRP30968 328 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CD52P31358 61 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 GABRA3P34903 492 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 THPOP40225 353 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 GALR1P47211 349 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 GABRA2P47869 451 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 DAP3P51398 398 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 SNU13P55769 128 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 CCL23P55773 120 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 RPL15P61313 204 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 RPL27P61353 136 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 QRFPP83859 136 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 EWSR1Q01844 656 aaKnown RBP eCLIP4.79□□□□□ -1.64
CHD9-210ENST00000564582 ZNF92Q03936 586 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 EXT1Q16394 746 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SGCBQ16585 318 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 TMEM249Q2WGJ8 235 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 PLPPR5Q32ZL2 321 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 FHL5Q5TD97 284 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 C1orf140Q5VVS0 124 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 ZNF474Q6S9Z5 364 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 TMEM182Q6ZP80 229 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 TMPPEQ6ZT21 453 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 MEX3DQ86XN8 651 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 FAM219AQ8IW50 185 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 C11orf42Q8N5U0 333 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CYB561D1Q8N8Q1 229 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 LRRC75AQ8NAA5 344 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CADM4Q8NFZ8 388 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 OR5AU1Q8NGC0 362 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 OR2A1Q8NGT9 310 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 MRGPRFQ96AM1 343 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 LMLNQ96KR4 655 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 GAL3ST4Q96RP7 486 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 LPAR4Q99677 370 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 ATP5SQ99766 215 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 TXNIPQ9H3M7 391 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 RIMS4Q9H426 269 aaPredicted RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 MMP25Q9NPA2 562 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 SERINC1Q9NRX5 453 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 TAS2R4Q9NYW5 299 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 C5AR2Q9P296 337 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 CD84Q9UIB8 345 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
CHD9-210ENST00000564582 DAPP1Q9UN19 280 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 B9D1Q9UPM9 204 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
CHD9-210ENST00000564582 WDR90Q96KV7 1748 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PLXNB3Q9ULL4 1909 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 TRAV36DV7A0A075B6V5 113 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 LOC107986453A0A1B0GWG9 222 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 A0A1W2PPV9 198 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PRAMEF26H0Y7S4 382 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 PDE6DO43924 150 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SNRPCP09234 159 aaKnown RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 WNT2P09544 360 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 H2BFMP0C1H6 154 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 RFPL3SP0C7P2 107 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 ZNF728P0DKX0 622 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 SMIM10L1P0DMW3 83 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 TDGF1P13385 188 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 IGFBP2P18065 325 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 FKBP2P26885 142 aaKnown RBP4.78□□□□□ -1.64
CHD9-210ENST00000564582 ATP6V0CP27449 155 aa4.78□□□□□ -1.64
CHD9-210ENST00000564582 CHRNB4P30926 498 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms