RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 LOC102724200A0A096LPH7 203 aaPredicted RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 TRAV8-3A0A0A6YYJ7 113 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 MYBPHLA2RUH7 354 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 OR6C70A6NIJ9 312 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 FAM183AA6NL82 134 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 GOLGA6L19H0YKK7 550 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 GYG2O15488 501 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 SSNA1O43805 119 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 APOEP02649 317 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 RPS17P08708 135 aaKnown RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 OR4Q2P0C623 313 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 ATF1P18846 271 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 RPS12P25398 132 aaKnown RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 IDH2P48735 452 aaKnown RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 CCL23P55773 120 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 PPP1CAP62136 330 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 SMAGPQ0VAQ4 97 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 UAP1Q16222 522 aaPredicted RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 CLEC12BQ2HXU8 276 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 ATP6AP1LQ52LC2 224 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 SPIN4Q56A73 249 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 SYPL2Q5VXT5 272 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 CST9Q5W186 159 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 LPCAT4Q643R3 524 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 LRRN1Q6UXK5 716 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 MUC15Q8N387 334 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 OR4P4Q8NGL7 312 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 OR4C13Q8NGP0 309 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 ZNF420Q8TAQ5 688 aaPredicted RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 PIGXQ8TBF5 258 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 PHOSPHO2Q8TCD6 241 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 HAVCR2Q8TDQ0 301 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 RAB8BQ92930 207 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 MRPL48Q96GC5 212 aaKnown RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 PPP1R36Q96LQ0 422 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
UBR1-205ENST00000564540 IP6K3Q96PC2 410 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 LINC01587Q99440 93 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 PRSS27Q9BQR3 290 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 METTL9Q9H1A3 318 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 MAP1LC3AQ9H492 121 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 VSIRQ9H7M9 311 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 DMAC2Q9NW81 257 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 GUCA1BQ9UMX6 200 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 TRIP11Q15643 1979 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 ZSWIM8A7E2V4 1837 aa1.87□□□□□ -2.11
UBR1-205ENST00000564540 ABCC11Q96J66 1382 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 SETD1AO15047 1707 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 RIMS2Q9UQ26 1411 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 IGHV7-4-1A0A0J9YVY3 117 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 A0A1W2PQL4 384 aaPredicted RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 TMEM72A0PK05 275 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PGPA6NDG6 321 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ZNF878C9JN71 531 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 M0R036 132 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 EIF1BO60739 113 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 OR2A4O95047 310 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 RPP14O95059 124 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 IFNA6P05013 189 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ISG15P05161 165 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 CALB1P05937 261 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 CD99P14209 185 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 AKR1C4P17516 323 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PSMA1P25786 263 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 ADORA1P30542 326 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PPP1R2P41236 205 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 EIF1P41567 113 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 CEBPGP53567 150 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 LSM6P62312 80 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 ACSM3Q53FZ2 586 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 OGFRL1Q5TC84 451 aaPredicted RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 GLYATQ6IB77 296 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PPP1R2P3Q6NXS1 205 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 FAM173BQ6P4H8 233 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 CD200R1LQ6Q8B3 271 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 CLEC20AQ6ZU45 233 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 MTERF4Q7Z6M4 381 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 SLC25A29Q8N8R3 303 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ZIC4Q8N9L1 334 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 OR6K3Q8NGY3 331 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ORAOV1Q8WV07 137 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ASB13Q8WXK3 278 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 TESCQ96BS2 214 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 OTUB2Q96DC9 234 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 CCDC42Q96M95 316 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 OR2A7Q96R45 310 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 MRPS26Q9BYN8 205 aaKnown RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 ZNF436Q9C0F3 470 aaPredicted RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 CHST5Q9GZS9 411 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PARP11Q9NR21 331 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ZNF706Q9Y5V0 76 aaPredicted RBP1.86□□□□□ -2.11
UBR1-205ENST00000564540 SNX10Q9Y5X0 201 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 ALG5Q9Y673 324 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 SIGLEC1Q9BZZ2 1709 aa1.86□□□□□ -2.11
UBR1-205ENST00000564540 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
UBR1-205ENST00000564540 ZFYVE9O95405 1425 aa1.85□□□□□ -2.11
UBR1-205ENST00000564540 C9orf84Q5VXU9 1444 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms