RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SNRNP70P08621 437 aaKnown RBP11.92□□□□□ -0.5
SPG7-210ENST00000564409 TMEM11P17152 192 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 IGFBP3P17936 291 aaPredicted RBP11.92□□□□□ -0.5
SPG7-210ENST00000564409 FSTP19883 344 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 SSTR5P35346 364 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 ZNF816Q0VGE8 651 aaPredicted RBP11.92□□□□□ -0.5
SPG7-210ENST00000564409 HES1Q14469 280 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 TMEM30BQ3MIR4 351 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 DMKNQ6E0U4 476 aaPredicted RBP11.92□□□□□ -0.5
SPG7-210ENST00000564409 STX19Q8N4C7 294 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 LINC00311Q8N616 119 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 RFESDQ8TAC1 157 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 ZNF184Q99676 751 aaPredicted RBP11.92□□□□□ -0.5
SPG7-210ENST00000564409 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
SPG7-210ENST00000564409 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
SPG7-210ENST00000564409 SERPINA2P20848 420 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 IL3RAP26951 378 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 EBI3Q14213 229 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 UTF1Q5T230 341 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 C5orf56Q8N8D9 126 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 OR51D1Q8NGF3 324 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 ZFP57Q9NU63 452 aa11.91□□□□□ -0.5
SPG7-210ENST00000564409 SIRT4Q9Y6E7 314 aaPredicted RBP11.91□□□□□ -0.5
SPG7-210ENST00000564409 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 EFCAB10A6NFE3 127 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 FAM90A7PA6NKC0 464 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 FAM90A23PA8MXZ1 464 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 HSD17B6O14756 317 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 CA11O75493 328 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 CD1AP06126 327 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 GLAP06280 429 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 GNG10P50151 68 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 SLC35B1P78383 322 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 SLC22A6Q4U2R8 563 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 FOXB2Q5VYV0 432 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 TRAT1Q6PIZ9 186 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 ZNF497Q6ZNH5 498 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 IZUMO1Q8IYV9 350 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 ZNF485Q8NCK3 441 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 LEAP2Q969E1 77 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 GON7Q9BXV9 100 aa11.9□□□□□ -0.5
SPG7-210ENST00000564409 CNOT2Q9NZN8 540 aaKnown RBP11.9□□□□□ -0.5
SPG7-210ENST00000564409 TRBV5-7A0A0A0MS05 114 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 SDCBPO00560 298 aaPredicted RBP11.89□□□□□ -0.51
SPG7-210ENST00000564409 SPINT2O43291 252 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 TXNL1O43396 289 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGKV1D-33P01593 117 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGKV1-33P01594 117 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGHV3-7P01780 117 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGHG2P01859 326 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 PRB2P02812 416 aaPredicted RBP11.89□□□□□ -0.51
SPG7-210ENST00000564409 MT-ND4P03905 459 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGLL1P15814 213 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPG7-210ENST00000564409 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
SPG7-210ENST00000564409 ST3GAL4Q11206 333 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 LTC4SQ16873 150 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 KHDC1LQ5JSQ8 128 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 FOXRED2Q8IWF2 684 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 PGLYRP3Q96LB9 341 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
SPG7-210ENST00000564409 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
SPG7-210ENST00000564409 CLEC2DQ9UHP7 191 aa11.89□□□□□ -0.51
SPG7-210ENST00000564409 IGHV1-3A0A0C4DH29 117 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 SH2D7A6NKC9 451 aaPredicted RBP11.88□□□□□ -0.51
SPG7-210ENST00000564409 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 AIPO00170 330 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 LALBAP00709 142 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 MAPK3P27361 379 aaPredicted RBP11.88□□□□□ -0.51
SPG7-210ENST00000564409 CD1BP29016 333 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 STEAP3Q658P3 488 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 SLC35E3Q7Z769 313 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 MOB3BQ86TA1 216 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 GAPTQ8N292 157 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 OR8H1Q8NGG4 311 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 OR2T10Q8NGZ9 312 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 GGHQ92820 318 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 ST6GALNAC6Q969X2 333 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
SPG7-210ENST00000564409 PLCXD1Q9NUJ7 323 aa11.88□□□□□ -0.51
SPG7-210ENST00000564409 MRPS28Q9Y2Q9 187 aaKnown RBP11.88□□□□□ -0.51
SPG7-210ENST00000564409 TRAV8-7A0A075B6U6 113 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 TRAV39A0A0B4J263 110 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 ZNF137PP52743 207 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 RPL23AP62750 156 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms