RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 BEND2Q8NDZ0 799 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 OR10R2Q8NGX6 335 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 RAB3CQ96E17 227 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 SLC6A7Q99884 636 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 RNF167Q9H6Y7 350 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 C12orf4Q9NQ89 552 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.62□□□□□ -0.23
RNF40-206ENST00000564260 IDI2-AS1Q9NZ38 188 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 KCNIP1Q9NZI2 227 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 ZNF581Q9P0T4 197 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 TRAPPC2LQ9UL33 140 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 FAM96BQ9Y3D0 163 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 JMJD1CQ15652 2540 aa13.62□□□□□ -0.23
RNF40-206ENST00000564260 IGHV2-26A0A0B4J1V2 119 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 RAB27BO00194 218 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 F2RL2O00254 374 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 SPINT2O43291 252 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 SLC2A2P11168 524 aaPredicted RBP13.61□□□□□ -0.23
RNF40-206ENST00000564260 BRD3OSQ6XYD6 125 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 C6orf201Q7Z4U5 140 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 MRGPRDQ8TDS7 321 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 ACOT12Q8WYK0 555 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 KIRREL1Q96J84 757 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 SULT4A1Q9BR01 284 aa13.61□□□□□ -0.23
RNF40-206ENST00000564260 MEIOCA2RUB1 952 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 SOCS1O15524 211 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 SAA4P35542 130 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 RPS19P39019 145 aaKnown RBP13.6□□□□□ -0.23
RNF40-206ENST00000564260 SERPINB10P48595 397 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 PRRX1P54821 245 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 TMEM50BP56557 158 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
RNF40-206ENST00000564260 MRPS15P82914 257 aaKnown RBP13.6□□□□□ -0.23
RNF40-206ENST00000564260 SRSF7Q16629 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNF40-206ENST00000564260 LY6G6FQ5SQ64 297 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 IDNKQ5T6J7 187 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 GPR107Q5VW38 600 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 STEAP3Q658P3 488 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 ZNF880Q6PDB4 577 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
RNF40-206ENST00000564260 PRIMA1Q86XR5 153 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 MRPL30Q8TCC3 161 aaKnown RBP13.6□□□□□ -0.23
RNF40-206ENST00000564260 LGALS14Q8TCE9 139 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 AP3S1Q92572 193 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 PHF21AQ96BD5 680 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 KCNK15Q9H427 330 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 RHBDL2Q9NX52 303 aa13.6□□□□□ -0.23
RNF40-206ENST00000564260 DSCAML1Q8TD84 2053 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 UBE2QL1A1L167 161 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 C15orf65H3BRN8 121 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 NOL3O60936 208 aaKnown RBP13.59□□□□□ -0.23
RNF40-206ENST00000564260 DIRAS3O95661 229 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 PAHP00439 452 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
RNF40-206ENST00000564260 CLEC2LP0C7M8 214 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 HIST1H1DP16402 221 aaKnown RBP13.59□□□□□ -0.23
RNF40-206ENST00000564260 RORCP51449 518 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 NCS1P62166 190 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 LSM3P62310 102 aaKnown RBP13.59□□□□□ -0.23
RNF40-206ENST00000564260 HTD2P86397 168 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 PITPNAQ00169 270 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 BRICD5Q6PL45 260 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 Q6YL49 198 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 ABHD12Q8N2K0 398 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 PNKDQ8N490 385 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 OR9G1Q8NH87 305 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 ARL11Q969Q4 196 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 ZDHHC16Q969W1 377 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 ARHGAP5-AS1Q96IT6 56 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 FAAP24Q9BTP7 215 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 PECRQ9BY49 303 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 DPAGT1Q9H3H5 408 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 ING3Q9NXR8 418 aa13.59□□□□□ -0.23
RNF40-206ENST00000564260 AMMECR1Q9Y4X0 333 aaPredicted RBP13.59□□□□□ -0.23
RNF40-206ENST00000564260 IGHV3OR16-10A0A075B7F0 116 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 OOSP1A8MZH6 123 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 MFNGO00587 321 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 IGLV1-47P01700 117 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
RNF40-206ENST00000564260 SSTR5P35346 364 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 CEACAM3P40198 252 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 ARHGDIBP52566 201 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 EFNB2P52799 333 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 VBP1P61758 197 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 KLRD1Q13241 179 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 DEFB112Q30KQ8 113 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 PLAC9Q5JTB6 97 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 PRAMEF5Q5TYX0 476 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 SIGLECL1Q8N7X8 197 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 OR5R1Q8NH85 324 aa13.58□□□□□ -0.24
RNF40-206ENST00000564260 DYRK2Q92630 601 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms