RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 S100A14Q9HCY8 104 aa18.85■□□□□ 0.61
NME3-206ENST00000564252 SIRT4Q9Y6E7 314 aaPredicted RBP18.85■□□□□ 0.61
NME3-206ENST00000564252 KMT2CQ8NEZ4 4911 aaKnown RBP18.85■□□□□ 0.61
NME3-206ENST00000564252 IGHV1-3A0A0C4DH29 117 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 TMEM30CPA0ZSE6 113 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 CSTBP04080 98 aaKnown RBP18.84■□□□□ 0.61
NME3-206ENST00000564252 PPP3R1P63098 170 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 C8orf86Q6ZUL3 223 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 SLC35E3Q7Z769 313 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 LINC00596Q86U02 117 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 PQLC1Q8N2U9 271 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 ORAI1Q96D31 301 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 GPR61Q9BZJ8 451 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 ZFP57Q9NU63 452 aa18.84■□□□□ 0.61
NME3-206ENST00000564252 NBEAL2Q6ZNJ1 2754 aa18.83■□□□□ 0.61
NME3-206ENST00000564252 CCRL2O00421 344 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 GAPDHP04406 335 aaKnown RBP18.83■□□□□ 0.6
NME3-206ENST00000564252 SERPINA2P20848 420 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 DCKP27707 260 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 BDKRB2P30411 391 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 REG1BP48304 166 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 MOB3BQ86TA1 216 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 LINC00311Q8N616 119 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 OR52M1Q8NGK5 317 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 ARL11Q969Q4 196 aa18.83■□□□□ 0.6
NME3-206ENST00000564252 EAF1Q96JC9 268 aaPredicted RBP18.83■□□□□ 0.6
NME3-206ENST00000564252 IGHV3-72A0A0B4J1Y9 119 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 A0A1W2PP11 408 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 LINC01548A6NM66 108 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 OGG1O15527 345 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 IGFBP3P17936 291 aaPredicted RBP18.82■□□□□ 0.6
NME3-206ENST00000564252 SLC6A1P30531 599 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 MPV17LQ2QL34 196 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 DEFB121Q5J5C9 76 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 VAX1Q5SQQ9 334 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 TMPRSS11AQ6ZMR5 421 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 IZUMO1Q8IYV9 350 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 STPG2Q8N412 459 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 Q8N6K4 173 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 C8orf31Q8N9H6 132 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 OR13C5Q8NGS8 318 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 UBALD1Q8TB05 177 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 SMIM19Q96E16 107 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 PAK1IP1Q9NWT1 392 aaPredicted RBP18.82■□□□□ 0.6
NME3-206ENST00000564252 GFOD1Q9NXC2 390 aa18.82■□□□□ 0.6
NME3-206ENST00000564252 NUDT19A8MXV4 375 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 SDCBPO00560 298 aaPredicted RBP18.81■□□□□ 0.6
NME3-206ENST00000564252 LALBAP00709 142 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 SLC35B1P78383 322 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 ATAD3CQ5T2N8 411 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 FAM53AQ6NSI3 398 aaPredicted RBP18.81■□□□□ 0.6
NME3-206ENST00000564252 ZNF497Q6ZNH5 498 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 TGIF2LXQ8IUE1 241 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 FOXRED2Q8IWF2 684 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 COMMD1Q8N668 190 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 CCDC107Q8WV48 283 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 P2RX4Q99571 388 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 S100A13Q99584 98 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 ZNF184Q99676 751 aaPredicted RBP18.81■□□□□ 0.6
NME3-206ENST00000564252 BABAM2Q9NXR7 383 aa18.81■□□□□ 0.6
NME3-206ENST00000564252 TRBV5-5A0A0J9YX44 114 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 ORC5O43913 435 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 ZNF780AO75290 641 aaPredicted RBP18.8■□□□□ 0.6
NME3-206ENST00000564252 MYCNOSP40205 109 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 RIPK1Q13546 671 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 SLC22A6Q4U2R8 563 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 C11orf87Q6NUJ2 197 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 TMEM104Q8NE00 496 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 KLHL30-AS1Q8NEE0 82 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 ZNF555Q8NEP9 628 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 DPF1Q92782 380 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 ST6GALNAC6Q969X2 333 aa18.8■□□□□ 0.6
NME3-206ENST00000564252 SMPD3Q9NY59 655 aaPredicted RBP18.8■□□□□ 0.6
NME3-206ENST00000564252 IGHV3-43A0A0B4J1X8 118 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 MAGEA13PA6NCF6 341 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 NCBP2LA6PVI3 153 aaKnown RBP18.79■□□□□ 0.6
NME3-206ENST00000564252 GPX5O75715 221 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 MT-ND4P03905 459 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 IGHV3-43DP0DP04 118 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 GPR12P47775 334 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 Q8N9W7 124 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 OR2T10Q8NGZ9 312 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 NEK7Q8TDX7 302 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 RTN4IP1Q8WWV3 396 aaPredicted RBP18.79■□□□□ 0.6
NME3-206ENST00000564252 GHSRQ92847 366 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 RDH12Q96NR8 316 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 MCRIP2Q9BUT9 160 aaKnown RBP18.79■□□□□ 0.6
NME3-206ENST00000564252 ABCG5Q9H222 651 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 LIN7CQ9NUP9 197 aaKnown RBP18.79■□□□□ 0.6
NME3-206ENST00000564252 CLEC2DQ9UHP7 191 aa18.79■□□□□ 0.6
NME3-206ENST00000564252 DIMT1Q9UNQ2 313 aaKnown RBP18.79■□□□□ 0.6
NME3-206ENST00000564252 AP4M1O00189 453 aa18.78■□□□□ 0.6
NME3-206ENST00000564252 GTF2F2P13984 249 aa18.78■□□□□ 0.6
NME3-206ENST00000564252 RPS11P62280 158 aaKnown RBP eCLIP18.78■□□□□ 0.6
NME3-206ENST00000564252 Q3ZCU0 254 aa18.78■□□□□ 0.6
NME3-206ENST00000564252 DMKNQ6E0U4 476 aaPredicted RBP18.78■□□□□ 0.6
NME3-206ENST00000564252 ZNF695Q8IW36 515 aa18.78■□□□□ 0.6
NME3-206ENST00000564252 PLSCR3Q9NRY6 295 aa18.78■□□□□ 0.6
NME3-206ENST00000564252 RCC2Q9P258 522 aaKnown RBP18.78■□□□□ 0.6
NME3-206ENST00000564252 EXOSC1Q9Y3B2 195 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms