RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
AC004449.1-201ENST00000564240 TMEM138Q9NPI0 162 aa12.99□□□□□ -0.33
AC004449.1-201ENST00000564240 PAK1IP1Q9NWT1 392 aaPredicted RBP12.99□□□□□ -0.33
AC004449.1-201ENST00000564240 IGHV3-43A0A0B4J1X8 118 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 IGHV3-43DP0DP04 118 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 BDKRB2P30411 391 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 C18orf65Q6ZTR6 163 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 COMMD1Q8N668 190 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 OR2T10Q8NGZ9 312 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 TMEM106AQ96A25 262 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 SLC29A1Q99808 456 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 LINC00574Q9H8X3 128 aa12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 ZMAT5Q9UDW3 170 aaKnown RBP12.98□□□□□ -0.33
AC004449.1-201ENST00000564240 IGHV1-3A0A0C4DH29 117 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 BAG2O95816 211 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 IGHG2P01859 326 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 SLC22A6Q4U2R8 563 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 C11orf87Q6NUJ2 197 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 TEX38Q6PEX7 206 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 ZNF695Q8IW36 515 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 STPG2Q8N412 459 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 EAF1Q96JC9 268 aaPredicted RBP12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 DUX3Q96PT4 197 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 RASL11BQ9BPW5 248 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 GON7Q9BXV9 100 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 CHCHD3Q9NX63 227 aaKnown RBP12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 ZNF581Q9P0T4 197 aa12.97□□□□□ -0.33
AC004449.1-201ENST00000564240 LINC01548A6NM66 108 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 AP4M1O00189 453 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 ZNF780AO75290 641 aaPredicted RBP12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 LIMS3P0CW19 117 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 LIMS4P0CW20 117 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 SLC6A1P30531 599 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 EGFEM1PQ0D2K5 195 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 ZNF816Q0VGE8 651 aaPredicted RBP12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 PNLIPRP3Q17RR3 467 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 CXorf66Q5JRM2 361 aaPredicted RBP12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 OR2G6Q5TZ20 316 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 ZNF529Q6P280 563 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 ETV3LQ6ZN32 361 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 Q8NFD4 153 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 ORAI1Q96D31 301 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 CKLFQ9UBR5 152 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 TRAPPC2LQ9UL33 140 aa12.96□□□□□ -0.33
AC004449.1-201ENST00000564240 MCRIP1C9JLW8 97 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 AIPO00170 330 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 SPINT2O43291 252 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 GTF2F2P13984 249 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 MYL12AP19105 171 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 DCKP27707 260 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 ETV1P50549 477 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 PAX5Q02548 391 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 MED21Q13503 144 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 RIPK1Q13546 671 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 GPR176Q14439 515 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 SMN1Q16637 294 aaKnown RBP12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 MPV17LQ2QL34 196 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 XAF1Q6GPH4 301 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 PRR18Q8N4B5 295 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 OR52M1Q8NGK5 317 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 TFAP2CQ92754 450 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 RAB9BQ9NP90 201 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 GFOD1Q9NXC2 390 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 BABAM2Q9NXR7 383 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 GNG12Q9UBI6 72 aa12.95□□□□□ -0.34
AC004449.1-201ENST00000564240 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 CCL24O00175 119 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 ORC5O43913 435 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 MOSP00540 346 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 MT-ND4P03905 459 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 GPR12P47775 334 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 DGCR2P98153 550 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 GPR50Q13585 617 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 NHLRC3Q5JS37 347 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 JAGN1Q8N5M9 183 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 S100A14Q9HCY8 104 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 LIN7CQ9NUP9 197 aaKnown RBP12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 ETAA1Q9NY74 926 aa12.94□□□□□ -0.34
AC004449.1-201ENST00000564240 RPLP1P05386 114 aaKnown RBP12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 CD1BP29016 333 aa12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 EBI3Q14213 229 aa12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 SYT6Q5T7P8 510 aaPredicted RBP12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 LINC00311Q8N616 119 aa12.93□□□□□ -0.34
AC004449.1-201ENST00000564240 OR13C5Q8NGS8 318 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1090.6 ms